Gene Pden_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1958 
Symbol 
ID4578724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1961105 
End bp1961593 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content65% 
IMG OID639769278 
Producthypothetical protein 
Protein accessionYP_915746 
Protein GI119384690 
COG category[S] Function unknown 
COG ID[COG5328] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0415908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAT CCGCGAACCG GCTGTGCCGG ATCGACATCG ACGACAGTGC GTTGCCGCCG 
CCATCGCCCG AGATCGAGCA GGACCGGCGC GTCGCGGTCT TCGATTTGCT GGAAGACAAC
AGCTTCACCT TGCCTGGCCG CGAGGGGCAG GACGTTCCCC CCGGCCCCTA TGCGTTGGCT
CTGGCGGTGC GCGAGAAGCG GCTGGTTTTC GACATCGCCA CCGAATCGGG CAGCAAGGTG
GCCGAGTTCC ACCTGTCGCT GGGCCCGTTC CGGCAGACGG TCAAGGACTA CTTCCAGATC
TGCACCAGCT ATTTCGATGC GGTCAAGCGC CTGCCGCCGG CACAGATCGA AGCCATCGAC
ATGGCCCGGC GCGGCATTCA CAACGAGGGC GCCCGTACCT TGCAAGAGCG GCTGGAGGGC
AAGGCCGAGG TCGATATCGA CACCGCCCGG CGCCTGTTCA CCCTGATCTG CGCCTTGGTT
CCGGGGTGA
 
Protein sequence
MSQSANRLCR IDIDDSALPP PSPEIEQDRR VAVFDLLEDN SFTLPGREGQ DVPPGPYALA 
LAVREKRLVF DIATESGSKV AEFHLSLGPF RQTVKDYFQI CTSYFDAVKR LPPAQIEAID
MARRGIHNEG ARTLQERLEG KAEVDIDTAR RLFTLICALV PG