Gene Pden_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1957 
Symbol 
ID4578723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1960643 
End bp1961101 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content61% 
IMG OID639769277 
Productprotein tyrosine phosphatase 
Protein accessionYP_915745 
Protein GI119384689 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.33495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0426247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGAC CGATTCCCCA TTCGGTGCTG TTCTGCTGCG ACCATAACGC CATCCGTTCC 
CCCATGGCCG AGGGGATGAT GAAGAAATTC TACGGCCGTG CCGCCTATGT GCAATCGGCC
GGGGTCAAGA ACGACATGGA GATCGACGGC TTCGCCATCG CCGTCTGCAA GGAGATCGGG
ATCGAGCTTT CGACCCATCG CTCGCGTTCC TTCGAGGAGA TGAAGGCTTG GGGCGACGAC
CTGACCAGCT TTGACCTGGT GATCGCCCTG TCGCCGGCCA GCCAAAGGCA AGCCCTTGAA
CTGACGCGAG TTTCTCATCT GGATGTGGAA TACTGGCCGA TCATGGACCC CAGCGGCCTG
GCAGAGGGGC GCGAGGCGAA ACTGGCGCTT TACCGGACTG TGCGAGACCA GATCCGCAAG
CGGATGATCG AACGCTTCGG CCCCCCGATC GAGGTTTGA
 
Protein sequence
MAGPIPHSVL FCCDHNAIRS PMAEGMMKKF YGRAAYVQSA GVKNDMEIDG FAIAVCKEIG 
IELSTHRSRS FEEMKAWGDD LTSFDLVIAL SPASQRQALE LTRVSHLDVE YWPIMDPSGL
AEGREAKLAL YRTVRDQIRK RMIERFGPPI EV