| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1955 |
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| Symbol | |
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| ID | 4578721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1958193 |
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| End bp | 1959995 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639769275 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_915743 |
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| Protein GI | 119384687 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.80923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0566594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTGC ACGCCACCAT CGACCGGGTG ACCGACCGCA TCCGCGAGCG TTCTGCAAAA
AGCCGCAGCG CCTATCTGGC CAAGATCGCC CGCGCCGCCG AGGAAGGGCC GCGCCGCGCC
CATCTGTCCT GCGGCAACCA GGCCCATGCC TATGCCGCCA TGCCGGACAA GCAGGATCTC
GCCACCACGC GCAAGCCGAA CATCGGCATC GTCACCGCCT ATAACGACAT GCTCTCGGCC
CATCAGCCCT ATGAGCGCTA TCCCGACCTG ATCCGGCAGG CGGCCCATGC CGCAGGCGCT
ACGGCGCAGG TCGCGGGCGG CGTGCCGGCG ATGTGCGACG GCGTCACGCA GGGCCGGCCG
GGGATGGAGC TGTCGCTGTT CTCGCGCGAT GTGATCGCGC TGGCCTCGGG CGTGGCGCTG
ACGCATGACA CATTCGACGC GGCGCTGTAT CTGGGCGTTT GCGACAAGAT CGTGCCGGGG
CTGATCATCG CCGCCGGCAC CTTCGGCCAT ATCCCGGCGG TCTTCGTCCC GGCCGGTCCC
ATGCCCTCGG GCCTGCCGAA CGACGAGAAA TCCAAGGTCC GGCAGCAATT CGCCATCGGC
GAGGTCGGCC GCGAGGCGCT GATGGCGGCC GAGATGGCCA GCTATCACGC GCCCGGCACC
TGCACCTTCT ACGGCACGGC GAACACCAAC CAGATGCTGA TGGAGTTCAT GGGCCTGCAC
CTGCCCGGCT CCAGCTTCGT CAATCCGAAC ACGCCCTTGC GCGATGCGCT GACCAGCGCC
GCGGTCCAGC GCGCGGCCGC GATTACCCGG CTGGGCAACG ACTACCTGCC GGCAGGCGAG
GTGCTGGACG AACGCGCCTT CGTCAACGGC ATCGTCGGAC TGATGGCGAC CGGCGGCTCG
ACCAACCTGG TGCTGCACCT GCCTGCCATG GCGCGGGCGG CGGGGGTGAT CCTGGACCTC
GAGGATTTCC ACGACCTGTC CGAGACGGTG CCGCTGATGG CCCGGGTCTA TCCCAACGGG
CTGGCCGACG TGAACCATTT CCATGCCGCC GGCGGCCTTG GCTACATGAT CGGCCAATTG
CTGGATGCCG GGCTGCTGCA TCAGGACGTG CGCACCATCG CCGGCGGCGG CCTGGACCAA
TATGCCCACG AACCCCGGCT GAAGGACGGC CGGATCGAAT GGGTCGAAGG CGCGCGCGAA
ACGCTGAACG ACAAGATCCT GCGCCCGGCC GCCGATCCTT TCGCCCCGAC AGGCGGGCTG
AAGCAGCTTT CCGGCAATCT GGGCCGGGGG GTCATCAAGG TCTCGGCCGT GGCGCCCGAG
CGCCATGTCA TCGAGGCCCC CGTCCGGGTG TTTTCCGACC AGGAAGAGGT GAAGGCCGCC
TTCAAGCGCG GCGAGTTCAC CGAGGACGTG ATCGTCGTCG TCCGCTTCCA GGGACCGCGT
GCCAATGGCA TGCCCGAACT GCATTCGCTG ACCCCCACGC TGGCCGTGCT GCAAGATCGC
GGCCTGCGGG TGGCGCTGGT CACGGACGGC CGCATGTCCG GCGCCTCGGG CAAGGTTCCC
GCCGCGATCC ATATCTCGCC CGAGGCGGCA GATGGCGGAC CGCTGGCGCG GCTGCGCGAC
GGCGACCTGG TCCGGCTGGA TGCGGTAGGC GGCACGCTGT CCTGCCTCGC CGCCGGCTTC
GAGGATCGCC AGCCGGCCGA ACATGACCCC TCGCATTCGG CCGAGGGATT GGGGCGCGAG
TTGTTCGCCG CCTTCCGTCG CCATGTCGGG CCGGCGACCG AGGGCGCGGC GGTCGTCGTC
TGA
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| Protein sequence | MTLHATIDRV TDRIRERSAK SRSAYLAKIA RAAEEGPRRA HLSCGNQAHA YAAMPDKQDL
ATTRKPNIGI VTAYNDMLSA HQPYERYPDL IRQAAHAAGA TAQVAGGVPA MCDGVTQGRP
GMELSLFSRD VIALASGVAL THDTFDAALY LGVCDKIVPG LIIAAGTFGH IPAVFVPAGP
MPSGLPNDEK SKVRQQFAIG EVGREALMAA EMASYHAPGT CTFYGTANTN QMLMEFMGLH
LPGSSFVNPN TPLRDALTSA AVQRAAAITR LGNDYLPAGE VLDERAFVNG IVGLMATGGS
TNLVLHLPAM ARAAGVILDL EDFHDLSETV PLMARVYPNG LADVNHFHAA GGLGYMIGQL
LDAGLLHQDV RTIAGGGLDQ YAHEPRLKDG RIEWVEGARE TLNDKILRPA ADPFAPTGGL
KQLSGNLGRG VIKVSAVAPE RHVIEAPVRV FSDQEEVKAA FKRGEFTEDV IVVVRFQGPR
ANGMPELHSL TPTLAVLQDR GLRVALVTDG RMSGASGKVP AAIHISPEAA DGGPLARLRD
GDLVRLDAVG GTLSCLAAGF EDRQPAEHDP SHSAEGLGRE LFAAFRRHVG PATEGAAVVV
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