Gene Pden_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1952 
Symbol 
ID4581073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1954763 
End bp1956265 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content66% 
IMG OID639769272 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_915740 
Protein GI119384684 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.139543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0234698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACCGC TAACATCGGC TAATCGGCAG ATCAGCGATG AGGAGGCAGC GATGGTTTCA 
CGCATCATTC CGGTTGAGGA TTTCGACCTG GTGATCTTTG GTGCAACCGG CGACCTGGCC
AGGCGCAAGA TCGTGCCCGG GCTTTACCGG CGTTTCGTGG CCGGGCAGGT GCCGGACAGC
GCGCGCATCA TCGGCGCGGC CCGCACCCGT CAGGACGACG ATGCCTTCCG CGCCGAGATG
CGGGCCGCGA TCGAGGAGTT CATCGGCCCC GGCCAGGACC CGGCGCAGCT TTCGGCCTTT
CTGGACATGC TGGGCTATGT CGCCATCGAC GCACGCGGCA CCGACGGCTG GGCCGAGCTC
AAGGCGCGGG TGCGTCCGGG GGTGGTGCAT GCCTTCTATT TCTCGGTCGC GCCGGCGCTT
TTCGGCGATA TCGCCGAGCG GCTGGCGGCC AATGGCATCG CCGATGCGGA CAGCCGCATC
GTCGTCGAAA AGCCCTTTGG CCGCGACCTT GCCACCGCGC GCGCGCTGAA TGCGACGCTG
GCCCGGCATT TCGACGAGAA CCAGATCTAC CGGATCGACC ATTATCTCGG CAAGGAAACC
GTCCAGAACC TGATGGCGGT GCGCTTTGCA AACATCCTGT TCGAGCCGCT GTGGAACGCG
CAATATGTGG ACCATGTCCA GATCACCGTG GCCGAGACGG TGGGCGTCGG CGGGCGTGGC
GAATATTACG ACCATTCCGG TGCCATGCGG GACATGGTGC AGAATCACCT GATGCAGCTT
CTGTGCCTGA TCGCGATGGA GCCGCCCTAT CATTTCGATC CCGATGCGGT GCGCGACGAA
AAGCTCAAGG TGATCCGCGC GCTCGAGCCG CTCGCGGCCG AGGACATCGT GCGCGGCCAG
TATGTGGCCG GCCCCGACGG CCCCGGCTAT CTGGAGGATG CCGAAAACCC GCTCTCGCGC
ACCGAAAGCT TCGTGGCGCT GAAGGTGCGG ATCGCCAACT GGCGCTGGAC CGGCACACCC
TTCTATCTGC GCACCGGCAA GCGGCTGCGT GCGCGCACCA GCGAGATCGT CGTCACCTTC
AAGGAGCCGC CGCATTCGAT CTTCGACGAC GGCGGCACGC ATAAGGCGAA CCAACTGGTC
ATCAAGCTGC AGCCGAACGA GGGCATGCAC CTGACCGTGA TGATCAAGGA GCCGGGACCG
GGCGGCATGC GCCTGGTGCA GGTGCCGCTG GACATGAGCT TTGCCGATGC GCTGGGGGCC
GAGGGCTCCG ACATGCCCGA CGCCTATGAG CGGTTGATCA TGGACGTGAT CCGCGGCAAC
CAGACCCTGT TCATGCGCGG CGACGAGGTC GAGGCCGCCT GGGCCTGGAC CGACCCGATC
ATCGGGGCCT GGGAGGCCGG CTCGAAGCGG CCCGAGCCCT ACGACCCCGG CTCCAGCGGC
CCCGAGGAGG CGCTGCGCCT GCTGCATCGC GACAACCGTC GCTGGAGGGA GATCCGGCCA
TGA
 
Protein sequence
MLPLTSANRQ ISDEEAAMVS RIIPVEDFDL VIFGATGDLA RRKIVPGLYR RFVAGQVPDS 
ARIIGAARTR QDDDAFRAEM RAAIEEFIGP GQDPAQLSAF LDMLGYVAID ARGTDGWAEL
KARVRPGVVH AFYFSVAPAL FGDIAERLAA NGIADADSRI VVEKPFGRDL ATARALNATL
ARHFDENQIY RIDHYLGKET VQNLMAVRFA NILFEPLWNA QYVDHVQITV AETVGVGGRG
EYYDHSGAMR DMVQNHLMQL LCLIAMEPPY HFDPDAVRDE KLKVIRALEP LAAEDIVRGQ
YVAGPDGPGY LEDAENPLSR TESFVALKVR IANWRWTGTP FYLRTGKRLR ARTSEIVVTF
KEPPHSIFDD GGTHKANQLV IKLQPNEGMH LTVMIKEPGP GGMRLVQVPL DMSFADALGA
EGSDMPDAYE RLIMDVIRGN QTLFMRGDEV EAAWAWTDPI IGAWEAGSKR PEPYDPGSSG
PEEALRLLHR DNRRWREIRP