Gene Pden_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1951 
Symbol 
ID4581072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1954092 
End bp1954766 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID639769271 
Product6-phosphogluconolactonase 
Protein accessionYP_915739 
Protein GI119384683 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.433607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0210243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG AATTCATCGA ATATCCCGAC CGCGAGATGC TGTTTCTGTC CCTGACCGAC 
CGCTTGGCGG GGCAGCTGTC GCAGCATTTG CGGGTGAACG ACAGCGCCAG TCTCTGCGTG
CCGGGCGGCA CCACGCCGGC GCCGCTTTAC GACTATCTCT CGGGCAGCGA GGTCGACTGG
CCGCGCGTCG CCGTGCTGCT CAACGACGAG CGCTGGGTGG ATGGCGAGCA TCTGCGCTCG
AACGGCCGGC TCCTGCGCCG CCACCTGCTC AAGGACAAGG CGGCGGCGGC TCGCTATATC
GACCTCTATA CCGGCGACGA ACGCCCCGAG GATGCGGTGC CGGCGCTGGC CGAGGCCATC
GCCCCGCATC TGCCGCTGAC CGTGCTGCTG CTGGGCATGG GCACCGACAT GCATACCGCA
AGCCTGTTCC CAGCCGCCTC GGAAACCGTG CTGGCGCTGG CGCCCGACGC CCCGCCGGTA
ATGGCTGTCA ACAGCGTCAA GGACGAGCCC AGGATCACCC TGACCGCCTC GGCGCTGCGC
GGTGCGATCA ACACCCATCT GCTGATCGCC GGCGCCGACA AGCGCGAGGC TTTCGAGCGT
GCGCAGGGCC TCGACCCGAC CGAGGCGCCG ATCCGCGCTT TCCTTGGCGA CATCACCGTG
CATTGGGCAG AGTGA
 
Protein sequence
MTLEFIEYPD REMLFLSLTD RLAGQLSQHL RVNDSASLCV PGGTTPAPLY DYLSGSEVDW 
PRVAVLLNDE RWVDGEHLRS NGRLLRRHLL KDKAAAARYI DLYTGDERPE DAVPALAEAI
APHLPLTVLL LGMGTDMHTA SLFPAASETV LALAPDAPPV MAVNSVKDEP RITLTASALR
GAINTHLLIA GADKREAFER AQGLDPTEAP IRAFLGDITV HWAE