Gene Pden_1950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1950 
Symbolpgi 
ID4581071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1952489 
End bp1954090 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content69% 
IMG OID639769270 
Productglucose-6-phosphate isomerase 
Protein accessionYP_915738 
Protein GI119384682 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0166] Glucose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.328568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0244382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT GGAGCCGGCT GCAAGACTAC CGCAAATCCC AGGGCGCGCT GCGGATCGAG 
GCGCTGTTTG ACGCCGACCC AGCGCGCGCC ACCGCCTTTT CGACCAGCGC CGAAGGACTG
GTGCTGGACT GGTCCAAGAC AACCATCGAC ACGGGCGCGC GCGACCTGCT GCTGGAACTG
GCCGCGCCCG TCCCCGGGCG TCGCGAGGCC ATGTTCGGCG GTGCGCGCAT CAACGAGACC
GAGGATCGCG CCGTGCTGCA TACCGCGCTG CGCAACCTGG ACGGCAGCGT CATGCTGGAC
GGCCGCGACG TGATGCCAGA GCTGCGCCGC ACGCATGAGC GGATGAGCGC ATTCGCCGCC
GCCATCCGCG ACGGCAGCTT TGCGGGGCAG GGCGGCCGCA TCACCGATGT CGTCAATATC
GGCATCGGCG GCTCGGACCT TGGCCCGGCC ATGGCCACGC GGGCGCTTTC GCCCTGGCAT
GACGGGCCGC GGGTGCATTT CGTCTCGAAC GTGGACGGGG CGGACATCGC CGATACGCTC
AAGGGGCTCG ATCCGGCGAC GACGCTGGTG ATCGTCGCCT CCAAGACCTT CACCACCATC
GAGACCATGA CCAACGCCCG GACGGCGCTG GACTGGATGG CGGCGTCGGT CGCCGATCCG
GCGGCGCAAT TCGCCGCGCT TTCCTCGGCC ACCGAGCGCA CCGCCGAATG GGGCATCGAC
GAGGCCCGCG TCTTCGGCTT CGAGGATTGG GTAGGGGGGC GCTATTCCAT GTGGGGGCCC
ATCGGCCTTT CGCTGATGAT CGCCATCGGA CCCGGGAATT TCGACCGCTT CCTTGCCGGC
GGCGCGGCCA TGGACCGCCA TTTCCGCGAG GCGCCCCTGG CGGGGAACTT GCCGGTGATC
CTGGCGCTGG TCGGCATCTG GCATAATCAG GTCTGCGGCT ACGGCACCCG CGCCGTGCTG
CCCTATGACA ACCGCCTTGC CCGCCTGCCG GCCTATCTGC AGCAGTTGGA GATGGAATCG
AACGGCAAGC GCGTCGCCAT GGACGGCAGC GACCTGACCC TGCCCTCTGG CCCGGTGGTC
TGGGGCGAGC CGGGCACCAA CGGCCAGCAC GCCTTCTATC AGCTGATCCA CCAGGGCACG
GCGGTGGTGC CATGCGAATT CATCATCGCC GCGCGCGGCC GCGAACCCGA CCTCGCGCAT
CACCACCTGC TCCTGATCGC CAATTGCCTG GCGCAATCCG AGGCGCTGAT GCGCGGCCGC
TCGCTTGACG AGGCGCGCGA GATCATGCGC GCCAAGGGCC TGACCGGCGC GGAACTGGAC
CGCCAGGCCC GCCATCGGGT CTTTCCGGGC AACCGCCCCT CGACCACGCT GCTGATCCCC
GAACTCGCCC CCTATACGCT GGGCCAGATC GTCGCGCTCT ACGAGCATCG CGTCTTTGCC
GAGGGCGTGA TCCTGGGCAT CAACAGCTTC GACCAATGGG GGGTCGAACT CGGCAAGGAA
CTGGCGCTGA AGGTGGCCCC GCTGCTCGAG GGCGAGCCCG CCCCCGGCCA CGACCCCTCG
ACCGAACATC TCGCGGCACT GATCCGCGAA GCGCGCCGCT GA
 
Protein sequence
MTIWSRLQDY RKSQGALRIE ALFDADPARA TAFSTSAEGL VLDWSKTTID TGARDLLLEL 
AAPVPGRREA MFGGARINET EDRAVLHTAL RNLDGSVMLD GRDVMPELRR THERMSAFAA
AIRDGSFAGQ GGRITDVVNI GIGGSDLGPA MATRALSPWH DGPRVHFVSN VDGADIADTL
KGLDPATTLV IVASKTFTTI ETMTNARTAL DWMAASVADP AAQFAALSSA TERTAEWGID
EARVFGFEDW VGGRYSMWGP IGLSLMIAIG PGNFDRFLAG GAAMDRHFRE APLAGNLPVI
LALVGIWHNQ VCGYGTRAVL PYDNRLARLP AYLQQLEMES NGKRVAMDGS DLTLPSGPVV
WGEPGTNGQH AFYQLIHQGT AVVPCEFIIA ARGREPDLAH HHLLLIANCL AQSEALMRGR
SLDEAREIMR AKGLTGAELD RQARHRVFPG NRPSTTLLIP ELAPYTLGQI VALYEHRVFA
EGVILGINSF DQWGVELGKE LALKVAPLLE GEPAPGHDPS TEHLAALIRE ARR