Gene Pden_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1946 
Symbol 
ID4581068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1948338 
End bp1948799 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content71% 
IMG OID639769267 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase Dut 
Protein accessionYP_915735 
Protein GI119384679 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0316902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0213172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCG AGGTGACGAT TCTGGTTCTG CGTGAACCGG GCGCCGATCC GGCGCTGCCC 
CTGCCCGAAT ACCAGACCCG CGGTTCGGCC GGCGCCGACC TGCGGGCCGA CCTGGGCGGG
GGCGAGCTGG TGCTCGATCC CGGCCAGATC CGCCTGGTTC CCACCGGGCT GCGCGTGCAG
ATCCCCGAGG GATACGAGAT GCAGGTCCGC CCCCGCTCCA GCCTGGCGCT GAAGCATGGC
GTGACGCTGC CCAACACGCC GGGGACCATC GACAGCGATT ATCGCGGGCC GCTGGGCGTG
ATCATGATAA ACCTCAGCCA GCAGCCCTAT ACCATCCATC ATGGCGAGCG CATCGCCCAG
GCCGTCGTCG CCCCGGTGAC CCGCGCGGCC TATGTCATGG CCGAGGCGCT GGAGCAGACC
GCGCGCGGCG AGGGCGGCTT CGGCTCGACC GGGCGGGCCT GA
 
Protein sequence
MAAEVTILVL REPGADPALP LPEYQTRGSA GADLRADLGG GELVLDPGQI RLVPTGLRVQ 
IPEGYEMQVR PRSSLALKHG VTLPNTPGTI DSDYRGPLGV IMINLSQQPY TIHHGERIAQ
AVVAPVTRAA YVMAEALEQT ARGEGGFGST GRA