Gene Pden_1942 details

Gene Information

• Locus tag: Pden_1942
• ID: 4581064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Paracoccus denitrificans PD1222
• Kingdom: Bacteria
• Replicon accession: NC_008686
• Strand: +
• Start bp: 1943580
• End bp: 1944182
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 639769263
• Product: hypothetical protein
• Protein accession: YP_915731
• Protein GI: 119384675
• COG category: [S] Function unknown
• COG ID: [COG3807] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0398084
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 3
• Fosmid unclonability p-value: 0.00719314
• Fosmid Hitchhiker: No
• Fosmid clonability: decreased coverage

Sequence

Gene sequence

ATGAAGCAAG GACGGGTCTG GCTCGGCGCC GCGATATTGG CGACGGGGAC GTGTTTGGGG 
TCGGCGGCGC TGGCGCAGGC CACCGATCCG GGTGAGACGC TGGATGCAAA GCAGATCCCC 
GGGCTTTCCG CCGATGCGAC AATCAGCCGC CATCAGGACG GCAAGCGCGA CCCGAACCGC 
GGGTCGGTGA CCAACCTGCC GCTACCGCGC TATGTCAGCC TGAAGGGCGG CGAGGGCAAT 
GCCCGGCGCG GCCCCAGCCT GTCTCATCGC ATCGACTGGG TGTTCCGCCA TGCCGGCATG 
CCGCTGCGCG TGGTGGCCGA ATTCGGCCAT TGGCGCCGGG TCGAGGACCA GGACGGCGCC 
GGCGGCTGGG TGCATTATTC GCTGCTGTCG GGCGTGCGCA CCGCCATCGT GACCAAGGAC 
ATGCTGGACC TGCTGGCGCG GCCCGAGCCG CGCGCCAGCG TGGTGGCCCG GGCCGAGGCC 
GGCGCCATCG TCCGGTTGCA CGAATGCATC GTCGACTGGT GCCGGGTCTC GGGCGGCGGC 
GAAAAGGGCT GGGTGCCCAA GACCACGATC TGGGGCGTCG ATCCCGACGA GATCCGCGAC 
TGA 

 

Protein sequence

MKQGRVWLGA AILATGTCLG SAALAQATDP GETLDAKQIP GLSADATISR HQDGKRDPNR 
GSVTNLPLPR YVSLKGGEGN ARRGPSLSHR IDWVFRHAGM PLRVVAEFGH WRRVEDQDGA 
GGWVHYSLLS GVRTAIVTKD MLDLLARPEP RASVVARAEA GAIVRLHECI VDWCRVSGGG 
EKGWVPKTTI WGVDPDEIRD