Gene Pden_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1941 
Symbol 
ID4581063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1942478 
End bp1943488 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content68% 
IMG OID639769262 
Productglyoxylate reductase 
Protein accessionYP_915730 
Protein GI119384674 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0819733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00730231 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCAGCCG TTCATGCGAC CGATCCGACC CGCTCGCGCC TTAAAGTTAC CGTGACCCGG 
CGCCTGCCCG AGGCGGTCGA GACCCGGATG TCCGAGCTTT TCGACGTTTC CCTGAACGCC
GAAGACCGCA GGATGAGTCG CGAGGAACTG GTCGCCGCCA TGCGCGTCTC GGATGTGCTG
GTGCCGACGA TCACCGATCA TATCGACGCC GCCATGCTGG CCCAGGCCGG CGACCGGCTG
AAGCTGATCG CCAATTACGG CGCGGGGGTG GACCATGTCG ACGTGCATTC CGCCCGCCAG
CGCGGCATCC TGGTCAGCAA CACCCCGGGC GTCGTGACCG AGGACACGGC CGATGTGGTC
ATGGCGCTGA TCCTGGGCGT TACCCGGCGC CTGCCCGAGG GCATGGCCGA GATGCAGGCC
GGCCGCTGGC AGGGCTGGTC GCCCACCGCG CATCTGGGCG GGCGGCTGGG CGGGCGGCGC
CTGGGCATCC TGGGCATGGG CCGCATCGGG CAGGCGGTGG CGCGGCGGGC GAACGCCTTC
GGCATGCAGG TGCATTATCA CAACCGCCGC CGCCTGCGCC CCGAGGTCGA GGCCGAGTTG
CAGGCGACCT ACTGGGAAAG CCTGGACCAG ATGCTGGCGC GCATGGATAT CGTCAGCGTG
AACGCGCCGC ATACGCCCTC GACCTTCCAT CTGCTGAATG CGCGGCGGTT GAAGCTGCTG
AAGCCCTCGG CCGTGGTGAT CAACACCTCG CGCGGCGAGG TCATCGACGA GAACGCGCTG
ACCCGGATGC TGCGCGCGGG CGAGATCGCG GGTGCCGGCC TGGACGTTTT CGAGCATGGG
CACGAGATCA ACCCCCGCCT GCGCGAGCTG CCCAATGTCG TGTTGCTGCC GCATATGGGT
TCGGCCACCA TCGAGGGGCG GGTCGAGATG GGCGAGAAAG TCATCATCAA CATCAAGACC
TTCGCCGACG GCCATCGGCC GCCGGACCTG GTGGTGCCCT CGATGCTGTG A
 
Protein sequence
MPAVHATDPT RSRLKVTVTR RLPEAVETRM SELFDVSLNA EDRRMSREEL VAAMRVSDVL 
VPTITDHIDA AMLAQAGDRL KLIANYGAGV DHVDVHSARQ RGILVSNTPG VVTEDTADVV
MALILGVTRR LPEGMAEMQA GRWQGWSPTA HLGGRLGGRR LGILGMGRIG QAVARRANAF
GMQVHYHNRR RLRPEVEAEL QATYWESLDQ MLARMDIVSV NAPHTPSTFH LLNARRLKLL
KPSAVVINTS RGEVIDENAL TRMLRAGEIA GAGLDVFEHG HEINPRLREL PNVVLLPHMG
SATIEGRVEM GEKVIINIKT FADGHRPPDL VVPSML