| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1936 |
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| Symbol | lipB |
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| ID | 4581058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1935600 |
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| End bp | 1936256 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639769257 |
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| Product | lipoyltransferase |
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| Protein accession | YP_915725 |
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| Protein GI | 119384669 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00922586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGACAGAAT GGATCACCGC CCCGGGCCTG ACCGACTATC AGGAAGCCCT CGCCTTCATG
GAGGCGCGCG CAGCCGCCAT CGCGGCCGGC GAGGCGGGCG AACTGGTCTG GCTGGTCGAG
CATCCGCCGC TCTATACCGC CGGCACTTCG GCCAAGGCAG CCGATCTGCT GGAGGCGCGC
TTTCCGGTCC ATGCCGTGGG GCGAGGCGGG CAATATACCT ATCACGGGCC CGGCCAGCGC
GTGGTCTATG TCATGCTGGA CCTGAACCGG CGCGGCCGCG ACGTGCGCGC CTTCGTCAAG
GCGCTGGAGA ACTGGGTGAT CGACGCGCTG GCCGAGTTCA ACCTGCGCGG CGAGATCCGC
GACGGCCGCG TCGGCGTCTG GATCGCCCGA CCCGACAAGG CGCCCCTGCC CGACGGCTCC
ATGCGCGAGG ACAAGATCGC CGCCATCGGC GTCAAGCTGC GTAGGTGGGT CAGCTTCCAC
GGCATCGCCA TCAACGTCGA GCCGGACCTG AACCATTACG CCGGCATCGT GCCCTGCGGC
ATCTCGGGGC ACGGCGTCAC CAGCCTGGTC GACATGGGCC TGCCGGTCGG CATGGATGAC
CTGGACCTGG CCCTGCGCCG CAGCTTCGCA CGGAACTTTC CGCCGCTCGC CGGCTGA
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| Protein sequence | MTEWITAPGL TDYQEALAFM EARAAAIAAG EAGELVWLVE HPPLYTAGTS AKAADLLEAR
FPVHAVGRGG QYTYHGPGQR VVYVMLDLNR RGRDVRAFVK ALENWVIDAL AEFNLRGEIR
DGRVGVWIAR PDKAPLPDGS MREDKIAAIG VKLRRWVSFH GIAINVEPDL NHYAGIVPCG
ISGHGVTSLV DMGLPVGMDD LDLALRRSFA RNFPPLAG
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