Gene Pden_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1933 
Symbol 
ID4580591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1929274 
End bp1930560 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content66% 
IMG OID639769253 
ProductO-acetylhomoserine/O-acetylserine sulfhydrylase 
Protein accessionYP_915722 
Protein GI119384666 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2873] O-acetylhomoserine sulfhydrylase 
TIGRFAM ID[TIGR01326] OAH/OAS sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.61014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0130502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAGA AATGGGGTTT CGACACCACC GCCATCCACG CCGGCAGCGC GCCCGACCCG 
GCGACCGGGG CGCGGCAGGT GCCGATCTAT CAGACCACGG CCTATGTCTT TCAGGATGCC
GCCCATGCCG CGCGGCTCTT TGGTCTGCGG GAGGTCGGCT ATATCTATTC CCGCCTGACC
AACCCGACCG TCGCCGCGCT TCAGGCCCGC GTGGCCGAGC TCGAGGGCGG GGCGGGGGCG
GTCTGCTGTT CCTCGGGCCA TGCGGCGCAG ATCATGGCGC TGTTCCCGCT GATGGGACCA
GGCAAGAACG TGATCGCCTC GACCCGGCTT TATGGCGGCA CCATCACTCA GTTCAGCCAG
ACCATCAAGC GGTTCGGCTG GTCGTGCAAA TTCGTCGATC TGGACGATCT CGATGCGCTG
CGGGCGGCTG TCGATGACGA CACCCGCGCC ATCTTCTGCG AATCGATCTC GAATCCCGGC
GGCTATGTCA CCGACATTCC GGCCGTGGCC AAGGTCGCGG ACCAGGTCGG CCTGCCGCTG
ATCGTCGACA ACACGCTGGC CACGCCCTGG CTGTGCAAGC CCATCGAGAT GGGCGCGACG
CTGGTCGTCC ACAGCCTGAC CAAATACATG ACCGGCAACG GCACGGTGAC CGGCGGCGTG
ATCGTGGATT CGGGCAAGTT CGACTGGTCG GCCTCGGGCA AGTTCCCCAG CCTGTCCGAG
CCCGAGCCGG CCTATCACGG GCTGAAGTTC CACGATACCT TCGGCGCGCT GGCCTATACC
TTCCACGGCA TCGCCATCGG GCTGCGCGAC CTGGGCATGA CCATGAACCC GCAGGCGGCG
CATTACACGC TGATGGGGAT CGAGACGCTG GGCCTGCGCA TGGAGCGTCA TGTCGGGAAT
GCGCAGAAGG TCGCGGAATG GCTGGAGGCC GACCCGCGCG TGACCTCGGT AACCTATGCG
GGGCTGGCCT CATCGCCCTG GAACGCGACG GCGCGGCGCG TCTATCCCAA GGGGGCGGGG
GCACTTTTCA CCTTTGCGAT CAAGGGCGGC TATGACGCGG CGGTGAAGCT GGTCGATAAC
CTGAAGCTCT TCAGCCATGT GGCGAACCTG GGCGATTCGC GTTCGCTGGT GATCCATTCC
GCCTCGACCA CCCACAGCCA ACTGACCGAC GAGCAAAAGA TCGCCGCCGG TGCCGGCCCG
GACGTGGTGC GGCTGTCCAT CGGCATCGAG GATGCGGCCG ACATCATCGC CGATCTGGAC
CAGGCATTGG CCGCTTCCAC CGCCTGA
 
Protein sequence
MSEKWGFDTT AIHAGSAPDP ATGARQVPIY QTTAYVFQDA AHAARLFGLR EVGYIYSRLT 
NPTVAALQAR VAELEGGAGA VCCSSGHAAQ IMALFPLMGP GKNVIASTRL YGGTITQFSQ
TIKRFGWSCK FVDLDDLDAL RAAVDDDTRA IFCESISNPG GYVTDIPAVA KVADQVGLPL
IVDNTLATPW LCKPIEMGAT LVVHSLTKYM TGNGTVTGGV IVDSGKFDWS ASGKFPSLSE
PEPAYHGLKF HDTFGALAYT FHGIAIGLRD LGMTMNPQAA HYTLMGIETL GLRMERHVGN
AQKVAEWLEA DPRVTSVTYA GLASSPWNAT ARRVYPKGAG ALFTFAIKGG YDAAVKLVDN
LKLFSHVANL GDSRSLVIHS ASTTHSQLTD EQKIAAGAGP DVVRLSIGIE DAADIIADLD
QALAASTA