Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1918 |
Symbol | pgk |
ID | 4580577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1913972 |
End bp | 1915168 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639769239 |
Product | phosphoglycerate kinase |
Protein accession | YP_915708 |
Protein GI | 119384652 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.253475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATT TCAACACGAT CGACGACCTG GATCTTGACG GCAAGGTGGT GCTTGTCCGC GTGGACGTGA ACGTCCCGGT CGAAAACGGC CAGGTCACCG ATGCCACGCG GATCGAAAAG ATCGTGCCGA CCGTCAAGGA CATCCAGGGC CGGGGCGGCA TCCCGGTGCT GCTGGCGCAT TTCGACCGCC CCAAGGGAAA GCGCGTGGAC GGCATGAGCC TGAAGGTCGT GCTGCCGGCG CTGGAAAAGG CGCTCGGCCA GCCGGTGAAG TTCTCGGACG AGGCCATCGG CGGCCCCGCC AAGCGCGCCG TGGCCGATCT GGCCAAGGGG GACGTGCTGC TGCTGGAGAA CACCCGCTTC TATCCGGGGG AAGAGACGAA TGACGCGACC TTCGCCGCCT CGCTGGCCGC GTTGGGCCAA GCCTATGTGA ACGACGCCTT TTCGGCCGCG CACCGGGCGC ACGCCTCGAC CGAGGGGATC GCGCGGCTCC TGCCCGCCGC GGCCGGCCGG CTGATGGAGG CGGAACTGAA GGCGCTGGAC GCCGCGCTCG GCAATCCGCA GCGCCCGGTC GTCGCCGTGG TCGGCGGCGC CAAGGTCTCG ACCAAGCTCG ACCTGCTCGG CAACCTGATC GAGAAGGTGG ACCACCTGGT CATCGGCGGC GGCATGGCCA ACACCTTCCT GGTCGCCCAG AACATCGAGG TCGGCAAATC GCTGGCCGAG CGCGACATGA CCGATACGGC GCGCGACATC CTGGCCAAGG CGGAAAAGAC CGGCTGCACC ATCCACCTGC CGGTGGACGT GGTGGTGGCG CGTGAATTCA AGGCCGGCGC CGACAGCGAG ACGGTGGCGG CGGATGCCTG CCCGGCCGAT GCGATGATCC TCGACGCCGG CCCCGCCACG GTGGCGAAGA TCCGCGAGGT TTTCGAAAGC AGCCGCACGC TGATCTGGAA CGGCCCGCTC GGCGCCTTCG AAATCCCGCC CTTCGACGCC GCGACCAATG CCGCGGCGCA AGAAGCCGCG CGGCTGACCC GCGAGGGCAA GCTGATCTCG GTCGCCGGCG GCGGCGATAC GGTGGCGGCG CTGAACAAGG CCGGCGTTTC GGGCGACTTC ACCTTCATCT CGACCGCTGG CGGCGCCTTT CTGGAATGGA TGAAGGGCAA GGAACTGCCC GGCGTCGCGG CCTTGCAGAA ACGCTGA
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Protein sequence | MADFNTIDDL DLDGKVVLVR VDVNVPVENG QVTDATRIEK IVPTVKDIQG RGGIPVLLAH FDRPKGKRVD GMSLKVVLPA LEKALGQPVK FSDEAIGGPA KRAVADLAKG DVLLLENTRF YPGEETNDAT FAASLAALGQ AYVNDAFSAA HRAHASTEGI ARLLPAAAGR LMEAELKALD AALGNPQRPV VAVVGGAKVS TKLDLLGNLI EKVDHLVIGG GMANTFLVAQ NIEVGKSLAE RDMTDTARDI LAKAEKTGCT IHLPVDVVVA REFKAGADSE TVAADACPAD AMILDAGPAT VAKIREVFES SRTLIWNGPL GAFEIPPFDA ATNAAAQEAA RLTREGKLIS VAGGGDTVAA LNKAGVSGDF TFISTAGGAF LEWMKGKELP GVAALQKR
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