| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1900 |
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| Symbol | |
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| ID | 4581120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1899930 |
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| End bp | 1900781 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639769220 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_915691 |
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| Protein GI | 119384635 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | [TIGR03416] choline ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.327714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAAC TGACTGCACT TCTGACCGAT ACAAAGATCC CGGTGGGCCG CACCGCCAAG
GCGATCTTCG ACTGGCTGAA CGCCAACGCC GCGGTCGTCT TCAACTTCAT CTCGAAGATG
ATGGACGGGC TGATCGGCGG CATCCTGAAG ATGCTGGTGT TCCCCCATCC GCTGGTCTTC
ACCCTGCTGG CCGTGGCATT GACCTGGGCG CTGCAACGCA GCTGGAAGAC CTGCCTGCTG
GTCGCGCTGG GCTTTCTGTT CATCCTCAAC CAGGGCTATT GGGACGCGAC GATGCAATCG
CTGACGCTGG TGCTGTCGGC CTGCGTGGTC TGCATGGCGA TCGGCGTGCC GCTGGGCATC
GCCGCCGCGC ACCGGCCCCG GCTCTATGCC TGGATGCGGC CGGTGCTGGA CCTGATGCAG
ACGCTGCCGA CCTTCGTCTA CCTGATCCCG GCCATCGTGT TCTTCGGCAT CGGCATGGTG
CCCGGCCTGA TCGCCACGGT GATCTTCGTG CTGCCGGCGC CGATCCGGCT GACGCATCTG
GGCATCAGCT CGACCCCCAA GGCGCTGGTC GAGGCCGCCA TCGCCTTCGG CGCCACGCCG
CGCCAGCTGC TGTGGAAGGT CGAGCTGCCC TCGGCCACTT CGCAGATCAT GGCAGGGCTG
AACCAGACCA TCATGCTGTC GCTGTCCATG GTCGTCATTG CGGCGCTGGT TGGCGCCTCG
GGGCTGGGCG TGCCGGTGGT CCGGGCGCTC AACAGCGTGA ACACGGCGCT GGGTTTCGAA
AGCGGCTTCA TCATCGTGGT GGTCGCCATC ATGCTGGACC GGATGCTGCG GGTAAGGGGG
CGCGATGAGT GA
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| Protein sequence | MDQLTALLTD TKIPVGRTAK AIFDWLNANA AVVFNFISKM MDGLIGGILK MLVFPHPLVF
TLLAVALTWA LQRSWKTCLL VALGFLFILN QGYWDATMQS LTLVLSACVV CMAIGVPLGI
AAAHRPRLYA WMRPVLDLMQ TLPTFVYLIP AIVFFGIGMV PGLIATVIFV LPAPIRLTHL
GISSTPKALV EAAIAFGATP RQLLWKVELP SATSQIMAGL NQTIMLSLSM VVIAALVGAS
GLGVPVVRAL NSVNTALGFE SGFIIVVVAI MLDRMLRVRG RDE
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