| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1899 |
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| Symbol | |
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| ID | 4581119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1898812 |
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| End bp | 1899765 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639769219 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_915690 |
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| Protein GI | 119384634 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.526364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTC GTCGCACCAC CGCCGCTCTT GCCGCCGGGC TGGTCGCCTC GCTCGCCACG
GCTGGCATCG CTGCGGCAGA AGAGCCGATG GAGTGCCGCA AGGTCGTCTT CTCGGATGTC
GGCTGGAGCG ATATCAGCGC CACCACGGCG CTGGCCTCGA CCGTGCTCCA GGCCCTCGGC
TACCAGACCG AGACCAAGAT CCTGTCGGTG CCGGTGACCT ATACCGCCAT GTCGACCGAC
GACGTGGACG TGTTCCTGGG CAACTGGATG CCGACGATGG AGGCCGATAT CGCCCCCTAT
CGCGAGGCGG GCACGGTCGA GATCGTGCGC ACGAACCTGA CCGGGGCGAA ATACACGCTG
GCGACGAACC AGGCCGGCGC CGATCTGGGC ATCGACGATT TCGGCAAGAT CGCCCAGCAC
AAGGACGCGC TGGCCGGCAA GATCTACGGC ATCGAGCCGG GCAATGACGG CAACCGCCTG
CTGCTGGACA TGGTGGCCGA CAACAAGTTC GACCTAGGCA CCTTCGAGGT CGTCGAAAGC
AGCGAACAGG GCATGCTGGC GCAGGTCGCC CGTGCCGACG CCGCCGGCAA GCCGGTGATC
TTCCTGGGCT GGGAGCCGCA TCCGATGAAC AGCCAGTTCC AGATGACCTA CCTGTCCGGC
GGCGACGAGG TCTTCGGCCC CGACTTCGGC GGCGCGCGGG TCGATACCAA CACCCGCGCC
GGCTATGTCG AGGCCTGCCC GAACGTCGGC AAGTTCCTGC AGAACCTGGA ATTCACCCTG
CCCATGGAGA ACGAGGTCAT GGGCCTGATC CTGAACGACG GCGAGCAGCC CGCCGATGCG
GCGCTGAAAT GGCTGAAGGC CAACCCGGAC GCGGCAAAAC CCTGGATCGC GGGCGTGACC
GCTGCCGATG GCGGCGATGC GCAGGCGGCC CTGGACACGG TGCTGTCCAA GTGA
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| Protein sequence | MTFRRTTAAL AAGLVASLAT AGIAAAEEPM ECRKVVFSDV GWSDISATTA LASTVLQALG
YQTETKILSV PVTYTAMSTD DVDVFLGNWM PTMEADIAPY REAGTVEIVR TNLTGAKYTL
ATNQAGADLG IDDFGKIAQH KDALAGKIYG IEPGNDGNRL LLDMVADNKF DLGTFEVVES
SEQGMLAQVA RADAAGKPVI FLGWEPHPMN SQFQMTYLSG GDEVFGPDFG GARVDTNTRA
GYVEACPNVG KFLQNLEFTL PMENEVMGLI LNDGEQPADA ALKWLKANPD AAKPWIAGVT
AADGGDAQAA LDTVLSK
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