| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1890 |
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| Symbol | |
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| ID | 4580549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1890087 |
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| End bp | 1891292 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639769210 |
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| Product | ribonuclease D |
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| Protein accession | YP_915681 |
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| Protein GI | 119384625 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.239057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.792489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCAA ACGCCCTGAA CGACCGCAAG CCCGAGATCC GCACCCTGAG CACCACGGCC
GAACTGGCCG AGTTCTGCGA ACTGGCCAAG GCCGAGCCCT ATGTCACGCT CGACACCGAA
TTCCTGCGCG AACGGACCTA TTACTCCAAG CTTTGCCTGA TCCAGGCCGC CCTGCCGCCG
GCATCGGCCA CCAAGGCTGC GGGCGGGCTT TCCGTGCTGA TCGACCCTCT GGTCGAGGGG
TTGTCGCTAG AGCCGCTCTA CGACCTGTTC CGGCACAAGC CGACGGTCAA GGTCTTCCAC
GCCGCGCGGC AGGATCTGGA GATCTTTTTC CACGACGCCG GCGTCATGCC CGATCCGCTG
TTCGACACCC AGATCGCCGC CATGGTCTGC GGCTTCGGCG AGCAGGTCGG CTATGAGACG
CTGGTCAAGA AGATCGCACG CCAGCCCCTG GACAAGTCCT CGCGCTTCAC CGACTGGTCG
CACCGGCCGC TGTCGGATGC CCAGGCGGCC TATGCGCTGG CGGACGTGAC GCATCTGCGG
GCGATCTACG AATTCCTTTC GGCCCAGCTC GACAAGACCG GACGCGCGCC CTGGCTTGCC
GAAGAGGTCG CGGTGCTCCT GAACCCCGAA ACCTACATCA CCCGCCCGGA AGAGGCGTGG
GAGCGGGTGC GCACCCGCTC CGGTTCGCCG CGCTTCCTGG CCGTGGTGCG CGAACTGGCG
CGCTTCCGCG AGACCTATGC GCAAGAGCGC GACATACCCC GCGCCCGGGT GTTCAAGGAC
GATGCGCTGA TCGAGCTGGC CTCGACCAAG CCGCTTTCCG AGGCCGATCT GGCCAAGTCC
CGCCTGCTGT TGCGCGACGC CCGCCGGGGC GAGATCGCCA ATGGCATCCT TTCGGCCGTC
AAGGCCGGGG TCGAGGCGCG CGACCTGCCC AAGCCCGCCC CCGAGGAACC GGGCCGTCCC
GGCAATGCCG CGCTGGCCGA TCTGCTGCGC GTGCTGCTGA AGGCCAAGGC CGATGCGGCG
GGCGTGGCGC CGCGGCTGAT CGCCTCGGCC TCCGATCTCG ACGCCATCGC CTCGGGCGCC
CGCGACCTGC CGGCGCTGCA TGGCTGGCGG GCCGAGGTCT TCGGCCATGA CGCGCTGCGG
CTCGCCTCGG GCGAGATTGC GCTTTCAGCC CAGGGCGGCG CGGTCAAGGT GGTGGCCTGC
CCCTAG
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| Protein sequence | MPANALNDRK PEIRTLSTTA ELAEFCELAK AEPYVTLDTE FLRERTYYSK LCLIQAALPP
ASATKAAGGL SVLIDPLVEG LSLEPLYDLF RHKPTVKVFH AARQDLEIFF HDAGVMPDPL
FDTQIAAMVC GFGEQVGYET LVKKIARQPL DKSSRFTDWS HRPLSDAQAA YALADVTHLR
AIYEFLSAQL DKTGRAPWLA EEVAVLLNPE TYITRPEEAW ERVRTRSGSP RFLAVVRELA
RFRETYAQER DIPRARVFKD DALIELASTK PLSEADLAKS RLLLRDARRG EIANGILSAV
KAGVEARDLP KPAPEEPGRP GNAALADLLR VLLKAKADAA GVAPRLIASA SDLDAIASGA
RDLPALHGWR AEVFGHDALR LASGEIALSA QGGAVKVVAC P
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