Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1889 |
Symbol | |
ID | 4580548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1889590 |
End bp | 1890090 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639769209 |
Product | MgtC/SapB transporter |
Protein accession | YP_915680 |
Protein GI | 119384624 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.296352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.742707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGACA TGCTGGCGGG CGAGTTCTCG CGCCCCATGA GCCTGCCCGC CGGCGTGGTC GTCCTGCGGC TGACCATGGC GGTTCTGCTG GGCGGGGTGA TCGGCTGGGA ACGCGAGGTC AAATCCCGCG CCGCCGGGCT GCGCACGCAT ATGCTGATCG CCCTGGCGGC GGCCTGCTTC ACGCTGGTGG CTATGGAACT GGTCGATTTC AGCCCGGTGA ACGAAGAGCA GCAGCGCACC GACCCGCTGC GGCTGATCGA GGCGGTGACG GCCGGCGTGG CCTTCCTTGC CGCTGGGTCC ATCGTCATCA ACAAGGGCAA TGTGCGCGGC ATCACCACCG GCGCCTCGAT GTGGCTGTGC GGCGCCGTCG GGCTGTGCTG CGGCACCGGC GACCTGCGGC TGGCGCTGAT GGCCACCGGC ATGGCGATGG TGGTGCTTTA CCTGATCCGG GTGCTTGTCA GCCCCGCCGC CCGCGAGGTG GCCGGGGGCG ACGAAGACTA G
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Protein sequence | MLDMLAGEFS RPMSLPAGVV VLRLTMAVLL GGVIGWEREV KSRAAGLRTH MLIALAAACF TLVAMELVDF SPVNEEQQRT DPLRLIEAVT AGVAFLAAGS IVINKGNVRG ITTGASMWLC GAVGLCCGTG DLRLALMATG MAMVVLYLIR VLVSPAAREV AGGDED
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