| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1887 |
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| Symbol | |
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| ID | 4580546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1888501 |
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| End bp | 1889262 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639769207 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_915678 |
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| Protein GI | 119384622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.240221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGA CCCGTGTGAT CCCCTGCCTG GATGTCGCCG ATGGCCGCGT GGTCAAGGGC
GTGAACTTCG TCGACCTTCG CGATGCCGGC GATCCGGTCG AGGCGGCGCG CGCCTATGAC
GCGGCCGGCG CGGACGAGAT CTGCTTTCTC GACATCCACG CCACGCATGA GAATCGCGGC
ACCATGTACG ACCTGGTGAC GCGCACGGCC GAGGCCTGTT TCGTGCCGCT GACCGTGGGC
GGCGGCGTGC GCAGCCACCA GGACGTGCGT GCCCTGCTGC TGGCCGGGGC CGACAAGGTC
AGCTTCAACT CGGCCGCCGT CGCAAACCCG GACGTGATCG CCGAGGCCGC CGACCGTTTC
GGCAGCCAGT GCATCGTCTG CGCCATCGAC GCCAAGACCG TGGCGCCCGG CAAGTGGGAG
ATCTTCACCC ATGGCGGCCG CAAGCCCACC GGCATCGACG CGGTGGAATT CGCCCGCACC
GTCGCCGCCA AGGGCGCGGG CGAGATCCTG CTGACCAGCA TGGACCGCGA CGGCACCAAG
TCCGGCTTCA ACATCCCGCT GACCCGCGCC GTGGCCGATG CGGTCACGAT CCCGGTCATC
GCCTCGGGCG GGGTCGGCAT GCTGGAGCAT CTGGCCGAGG GCGTGCTGGA GGGCCATGCC
TCGGCGGTGC TGGCGGCCTC GATCTTTCAT TTCGGCACCT TCACCGTGCG CGAGGCCAAG
GAGCACCTGG CCGCCGCCGG CATCCCGGTG CGGCTGACAT GA
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| Protein sequence | MLKTRVIPCL DVADGRVVKG VNFVDLRDAG DPVEAARAYD AAGADEICFL DIHATHENRG
TMYDLVTRTA EACFVPLTVG GGVRSHQDVR ALLLAGADKV SFNSAAVANP DVIAEAADRF
GSQCIVCAID AKTVAPGKWE IFTHGGRKPT GIDAVEFART VAAKGAGEIL LTSMDRDGTK
SGFNIPLTRA VADAVTIPVI ASGGVGMLEH LAEGVLEGHA SAVLAASIFH FGTFTVREAK
EHLAAAGIPV RLT
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