| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1886 |
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| Symbol | |
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| ID | 4580545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1887757 |
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| End bp | 1888473 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639769206 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_915677 |
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| Protein GI | 119384621 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.52508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTTT ATCCCGCGAT CGACCTCAAG GACGGCAATT GCGTGCGCCT GCTGCGCGGC
GACATGGAGG CGGCGACCGT CTTCGGCACC GACCCCGCCG CCCAGGCCCG CGCCTTTCGC
GACGCCGGGG CGGAATGGCT GCATCTGGTC GACCTGAACG GCGCCTTTGC CGGCAAGCCG
GTGAACGCCG CCGCGGTCGA GGCGATCCTG GCCGCCATCG ACCTGCCCGT CCAGCTGGGC
GGCGGCATCC GCGACATGGC GACCATCGAA GGCTGGCTGG ACCGCGGGCT GGCACGGGTG
ATCCTGGGCA CGGTGGCGGT CGAGCAGCCC GAACTGGTAC GCGAGGCGGC GATGGCATTC
CCCGGCAAGA TCGCCGTGGG CATCGACGCG CGCGGCGGCC GGGTGGCGAC GCGCGGCTGG
GCCGAGGAAA CCGACGTGAA CGTCGTCGAC CTTGCGCATC GCTTCGAGGA CGCGGGCGTC
GCCGCGATCA TCTATACCGA CATCGACCGC GACGGCGCCA TGGCCGGTCC CAACATCGCC
GCGACCGAGG CGCTGGCACG GGCGGTCAAC GTTCCGGTCA TCGCCTCGGG CGGGGTCAGC
TCGATGCAGG ACCTGATGGC GCTGCGCGCG ACCGGGGTCA TCGCCGGGGC GATTTCCGGC
CGGGCGCTTT ACGACGGCGC CATCGACCTG AATGCGGCGC TGAAGGCGCT GGCCTGA
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| Protein sequence | MILYPAIDLK DGNCVRLLRG DMEAATVFGT DPAAQARAFR DAGAEWLHLV DLNGAFAGKP
VNAAAVEAIL AAIDLPVQLG GGIRDMATIE GWLDRGLARV ILGTVAVEQP ELVREAAMAF
PGKIAVGIDA RGGRVATRGW AEETDVNVVD LAHRFEDAGV AAIIYTDIDR DGAMAGPNIA
ATEALARAVN VPVIASGGVS SMQDLMALRA TGVIAGAISG RALYDGAIDL NAALKALA
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