Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1880 |
Symbol | |
ID | 4580539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1883878 |
End bp | 1884402 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639769200 |
Product | hypothetical protein |
Protein accession | YP_915671 |
Protein GI | 119384615 |
COG category | [S] Function unknown |
COG ID | [COG2862] Predicted membrane protein |
TIGRFAM ID | [TIGR00645] conserved hypothetical transmembrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCC TTCTCGAACG CAGCCTTTTC GCCAGTCGCT GGATGATGGC GCCGATCTAT GTCGGTCTGG CGCTGTCGCT GTTGATCCTG CTTTGGGTCT TTGCGCTGGA ACTGTGGCAC CTGGTCGGCA TCCTGCCGGT CATGACCGTC AACGACGCGG TGCTGGGCGT GCTGGCGCTG ATCGACCTGA GCCTGGCGGC GAACCTTTTG CTGATCGTGA TCTTTTCGGG CTACGAGAAT TTCGTCAGCC GCATGGACCT GAGCGAGCAT GAGGACAGGC CGGACTGGCA GGGCGAGGTC GATTTCTCGG GGCTGAAGCT GAAGCTGGTG GCCTCGATCG TGGCGATCTC GGGCATCCAT CTGCTGAAGG TGTTCATGGA TGTCAGCAAA TACGCCCCCG ATCAGATCCG CTGGATGGTG GTTATCCATC TGGTCTTCGT GATCTCGGGC GTGCTGCTGG CCGCGATGGA CTGGATCGCG AACCATGGCA AGACGCTGAA GAAGGCCAAG GCTTCCCAGG CATGA
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Protein sequence | MERLLERSLF ASRWMMAPIY VGLALSLLIL LWVFALELWH LVGILPVMTV NDAVLGVLAL IDLSLAANLL LIVIFSGYEN FVSRMDLSEH EDRPDWQGEV DFSGLKLKLV ASIVAISGIH LLKVFMDVSK YAPDQIRWMV VIHLVFVISG VLLAAMDWIA NHGKTLKKAK ASQA
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