| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1877 |
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| Symbol | |
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| ID | 4580536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1877974 |
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| End bp | 1879716 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639769196 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_915668 |
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| Protein GI | 119384612 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCT TTCTTTCCGT AGAATCCTCG CTGACCGGCC GCCTCTGGCG CGGTCCCGAA
GCCACGCTGG AACGCGCCGC CGAGGCGCTG GCCCAGGACA GCCGCCTGCC CCTGCCCGTC
AGCCGGGTGC TGGCCGCGCG GGGCGTGCCC GCGCATGAGG CGCCGCTTTA CCTCGATCCC
AAGCTGCGCG ACCTGCTGCC AGACCCTTCG AGCCTGCGCG ACATGGACAA GGCGGCCGAG
CGGCTGGTCG CGGCCGTGCT GGCCGGCCAG CGCATCGCCA TCTTCGCCGA TTACGATGTC
GATGGCGGCG CCTCGGCCGC GCTTCTGCTG GACTGGCTGC GCCGGCAGGG CCGCGACGCC
ACGCTCTATA TCCCCGACCG CATCGACGAG GGCTATGGCC CCAACGCCCC TGCCATCGCG
TCGCTGTCGC AGGGTCATGA CCTGATCATC TGCGTCGACT GCGGCACGCT CAGCCATGAG
GCGCTGGCGG CGGCGAGTTG CGATGTGATC GTGCTGGACC ATCACCAGGG CGGCGAAACC
CTGCCCCCGG TCCTGGCGGT GGTGAACCCG AATCGCGCCG ACGAGGACGG CAGCCTTGGA
CATCTCTGCG CCGCGGGCGT GGTGTTCCTG ACGCTGGTGC GCTGCAACAG CCTGCTGCGC
AGGGACGGCC ATCCGCAACC CGACCTGATC CCGCTCTTGG ACCTGGTGGC GCTGGCGACG
GTCGCGGATG TGGCGCCGCT GGTGGGCGTG AACCGCGCCT TCGTGCGGCA GGGGCTGCTG
GTCATGGCGC GGCGCGAACG TCCGGGCCTG GTGGCGCTGT CGGACGTGGC GCGGCTCGAT
TCGGCGCCGA ACGCCTTTCA CCTGGGCTTT CTCCTGGGGC CGCGCATCAA TGCCGGCGGC
CGGGTCGGGC GTGCCGATCT GGGCGCGTTG TGCCTGTCCT GCACCGACGG CCGGCAGGCC
GAGCGGCTGG CGGCCGAACT GGACGTCCTG AACCGCGACC GCCGCGCCAT CGAGGCCGCC
GTGCGCGACG AGGCGCTGGC CCAGGTCGAG GCCCGCGCCA GCGACAGCCT GGTCGCCTGG
GCGGCGGGCG ACGGCTGGCA TCCCGGCGTC GTCGGCATCG TTGCCGCGCG GGTGAAGGAG
GCGACCGGCC TGCCCTCGGT GGTGATCGGG GTAGAGGGCG GCATCGGCAA GGGCTCGGCC
CGCTCGGTGC CCGGCGTGGA CCTGGGCCGC GCCATCCAGC GCCTTTCGGC CGAGGGGCTG
CTGTTGAAGG GCGGCGGGCA TGCCATGGCA GCCGGCCTGA CAATCGAGGA GGCAAAGATC
CCCGCAGCCA TGGAGCGCCT GTCGCAGCTT CTGTCGCGCG AAATGGCCGA GCGTCCGGGC
GCCGGCGAGC TGCGCATCTC GGGCCTCATG GACCCCGCCG GGGCGACGGT CGAGCTGATG
CAGATGCTGG AGCGCGCCGG CCCTTTCGGC CAGGCGGCGC CGGCACCGCG CTTTGCCTTT
GCCGAGCAGC TGATCGACAG CGCGGGCGCG ATGGGCGACA GCCACCTGCG CCTGCGTTTC
CGCAGCCCCG GCAGCCCGGT GCTGGAGGCG GTGGCCTGGG GCGCGATGAA CGGCCCGCTG
GGTCCCGCGC TGCTGGGCGC CCGCGGCCGC TGCTTCCATC TGGCGGGCAA GCTGGAGCTA
TCGCAATGGG GCGGTCGCGA GCGGGTGCGG CTGCGTCTGG ACGATGCCGC GCCGGTGGGT
TGA
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| Protein sequence | MTAFLSVESS LTGRLWRGPE ATLERAAEAL AQDSRLPLPV SRVLAARGVP AHEAPLYLDP
KLRDLLPDPS SLRDMDKAAE RLVAAVLAGQ RIAIFADYDV DGGASAALLL DWLRRQGRDA
TLYIPDRIDE GYGPNAPAIA SLSQGHDLII CVDCGTLSHE ALAAASCDVI VLDHHQGGET
LPPVLAVVNP NRADEDGSLG HLCAAGVVFL TLVRCNSLLR RDGHPQPDLI PLLDLVALAT
VADVAPLVGV NRAFVRQGLL VMARRERPGL VALSDVARLD SAPNAFHLGF LLGPRINAGG
RVGRADLGAL CLSCTDGRQA ERLAAELDVL NRDRRAIEAA VRDEALAQVE ARASDSLVAW
AAGDGWHPGV VGIVAARVKE ATGLPSVVIG VEGGIGKGSA RSVPGVDLGR AIQRLSAEGL
LLKGGGHAMA AGLTIEEAKI PAAMERLSQL LSREMAERPG AGELRISGLM DPAGATVELM
QMLERAGPFG QAAPAPRFAF AEQLIDSAGA MGDSHLRLRF RSPGSPVLEA VAWGAMNGPL
GPALLGARGR CFHLAGKLEL SQWGGRERVR LRLDDAAPVG
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