| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1874 |
|---|
| Symbol | |
|---|
| ID | 4580533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1875928 |
|---|
| End bp | 1876554 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639769193 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_915665 |
|---|
| Protein GI | 119384609 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.535727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.714616 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA GCGACCCGTT CGGATTCGAC ATTTCCGCGG CCTCGGACAA GAAACGCCGG
GCCAAGGGCC GGCGCGGCAT GTCCGGCGCC TTCGAAACAT CGACGCGGCG ATGCGACAAG
GAGGGCTGCA ACCAGCCGGG CCAGTATCGC GCGCCGAAAT CCCCGCGGGC GCTGGACGAA
TACTATTGGT TCTGCAAGGA ACATGTGCGC GAATACAACC TGAACTGGAA CTATTTCCAG
GGCCAGTCCG AGGCCGAGTT CCAGGAATTC CTGGACAATG CCACGGTCTG GGAACGGCCG
ACCAAGCCCT TCGGCCGGGC CGCGCAGGAA CAGAAATGGG CCCGCCACGG CATCGACGAT
CCGCTGGAGA TCCTGGGCGC GAACGGCACC AACCCCGAGC TGCGCACCCG CACCGCGCGC
AAGCTGCCGC CGACCGAGCG CCGGGCGCTG GAGATCCTGG AGGCCAAGGA GACCTGGACC
CGCGCCGAGA TCCGCAAGCA ATACAAGTCC CTGGTCAAGG ATCTTCACCC GGACATGAAC
GGCGGCGACC GCTCGGACGA GGATCGGCTG CAAGAGGTGG TCTGGGCCTG GGACCAGATC
AAGGACAGCC GCAGCTTCAA GGACTGA
|
|---|
| Protein sequence | MSNSDPFGFD ISAASDKKRR AKGRRGMSGA FETSTRRCDK EGCNQPGQYR APKSPRALDE
YYWFCKEHVR EYNLNWNYFQ GQSEAEFQEF LDNATVWERP TKPFGRAAQE QKWARHGIDD
PLEILGANGT NPELRTRTAR KLPPTERRAL EILEAKETWT RAEIRKQYKS LVKDLHPDMN
GGDRSDEDRL QEVVWAWDQI KDSRSFKD
|
|---|
| |