Gene Pden_1867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1867 
Symbol 
ID4579126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1865782 
End bp1866636 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content71% 
IMG OID639769188 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_915660 
Protein GI119384604 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00662232 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.558522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGGAC GCGACATGAC CAAGGTGCCT TACCTGACCC CCGTGCCGGA CCCGGTTTCC 
GAACCCGATC CGGCGCCGCA TCTGCCGGGG CTCGCGCCGC AGGCCGTGGC CGAGCGCCGC
GCCGAGGAGG TGCTGGTCGT CGATGTCTCG GGCTTCGAGG GGCCGCTGGA CCTGCTGCTG
ACGCTGTCGC GCACGCAGAA GGTCGATCTG ATGCAGGTCT CGGTGCTGGA GCTTGCCGAC
CAGTATCTGG CCTTCGTCGA AGAGGCCCGC GCGCTGCGTA TCGAGCTGGC GGCGGATTAC
CTGGTCATGG CGGCCTGGCT TGCCTATCTC AAGTCGCGGC TGCTTCTGCC ACCCGACCCC
GAGGCCGAGG GGCCGAGCGC CGAGGAAATG GCCGCGCATC TGGCTTTCCA GCTGGAGCGG
CTGAACGCCA TGCGCGAGGC GGCGGCGCGG CTGATGGCCC GCGACCGGCT GGGGCAGGAC
CGCTTTGCAC GCGGCGCGCC CGAAACCGTG GCCCGCCAGC GCCAGGTCGC CTGGCAGGCC
GGGCTGATCG ACCTGATGCG CGCCTATGCC CGGCTGCGCA CCCGCGACGA GTTCCGCCCC
TATGCCTTCG ACCGCCGCGA CGTGCTGACC ATGGAGCAGG CGCTGGACCG GGTGCGCGGG
CTGATCGGCT TCGCCGGCGA CTGGACCGAG CTTTCCGCCT TTCTGCCCGA CGGCTGGGAG
GCCGATCCGC AGCGCCGCCG CTCGGCCACC GCGGCGACCT TTGCCGCGAC GCTGGAACTG
GCGCGGCAAG GCGCGCTGGA AATCTCCCAG GCCGGAACCT TTACCCCGAT CACCATCCGC
AGGCGCCCGC AATGA
 
Protein sequence
MPGRDMTKVP YLTPVPDPVS EPDPAPHLPG LAPQAVAERR AEEVLVVDVS GFEGPLDLLL 
TLSRTQKVDL MQVSVLELAD QYLAFVEEAR ALRIELAADY LVMAAWLAYL KSRLLLPPDP
EAEGPSAEEM AAHLAFQLER LNAMREAAAR LMARDRLGQD RFARGAPETV ARQRQVAWQA
GLIDLMRAYA RLRTRDEFRP YAFDRRDVLT MEQALDRVRG LIGFAGDWTE LSAFLPDGWE
ADPQRRRSAT AATFAATLEL ARQGALEISQ AGTFTPITIR RRPQ