| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1866 |
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| Symbol | |
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| ID | 4579125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1865120 |
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| End bp | 1865785 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639769187 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_915659 |
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| Protein GI | 119384603 |
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| COG category | [K] Transcription |
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| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
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| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00902439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.534464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGG ACGACATCGC CGCCCCCGAT CCCCAGCGTT TCCCGCCGCC GCCGCTGGCC
GAGCAGGAGC GCATGGTCGA AGCCATTTTG TTCGCCTCGG CCGAGCCGAT GAGCCAGCGC
GAAATCGCCG CGCGCCTGCC TGCCGGTTGC GATGTGGGCG AGGCGGTGCA GGCCCTGCGC
GCCCGCTATG AAGGGCGGGG GGTGCAACTG GCGCGCGTCG GCGATGCCTG GGCTTTTCGC
ACCGCCGCCG ATCTGGGGTT CCTGATGCAG GAAAGCGTGG TCGAAAGCCG CCGCCTGTCG
CGCGCCGCGA CCGAGACGCT GGCGATCATC GCCTATCACC AGCCCGTCAC CCGCGCCGAG
ATCGAGGAGA TCCGCGGTGT CGCCGTCAGC CGCGGCACGC TGGACCAGCT GATCGAGCTG
GACTGGGTCC GCATCGGTCG CCGCCGCCAG ACCCCCGGCC GCCCGGTGAC CTTCGTGGTG
ACCGAAGCCT TCCTGGATCA TTTCGGGCTG GAAAGCGCCC GCGACCTGCC GGGGCTGGCC
GAGCTGCGTG CGGCCGGCCT GCTCGAATCG CGCCCGCCGG GCGAGGGGCT CGCACCCGGC
CTGTTCGGCG AAGAGGGTGC CGATGAGGCC GAGGCGATGG CCGAGGATTT GTTCGAAGAT
GAGTAA
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| Protein sequence | MSQDDIAAPD PQRFPPPPLA EQERMVEAIL FASAEPMSQR EIAARLPAGC DVGEAVQALR
ARYEGRGVQL ARVGDAWAFR TAADLGFLMQ ESVVESRRLS RAATETLAII AYHQPVTRAE
IEEIRGVAVS RGTLDQLIEL DWVRIGRRRQ TPGRPVTFVV TEAFLDHFGL ESARDLPGLA
ELRAAGLLES RPPGEGLAPG LFGEEGADEA EAMAEDLFED E
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