Gene Pden_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1847 
Symbol 
ID4581031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1845710 
End bp1846435 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID639769167 
Productcbb3-type cytochrome c oxidase subunit II 
Protein accessionYP_915640 
Protein GI119384584 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.661997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATTC TTGAAAAGCA CAAGGTCCTG GAAAAGAACG CCACGCTTCT GCTGGTCTTT 
TCCTTCCTCG TGGTGACCAT CGGCGGCATC GTGGAAATCG CGCCGCTGTT CTATCTGCAA
AACACCATCG AAAAGGTGCA GGGCATGCGG CCCTATACGC CGCTGGAACT GAAGGGCCGC
GACATCTATG TCCGCGAGGG CTGCTATGTC TGCCACAGCC AGATGATCCG CCCGATGCGC
GACGAGGTCG AGCGTTACGG CCATTACAGC CTGGCGGCCG AGTCGATGTA TGACCATCCG
TTCCAATGGG GCTCCAAGCG GACCGGGCCG GACCTGGCCC GCGTTGGCGG CCGCTACTCG
GACGAATGGC ATCTCGACCA CTTGGTGGAC CCGCAGGCGG TGGTGCCGGA ATCGATCATG
CCGAAATACG GCTTCCTGCT GAATCGCCAG GTCGATGCCT CGAACATGCA GCAGCGGCTG
AAGACCGACG CGCTGGTCGG CGTCCCCTAT GACGACGCGA TGATCGCCGC GGCGGTCGAG
GATTTCCGTG CCCAGGCCGA CCCGGATGCG GATGCCTCGG GGCTGGAGGA ACGCTATCCG
GGTGCGCAGC AGCGCAATTT CGACCGCCGC CCCGGCGTGT CCGAGATGGA TGCCCTGATC
GCCTATCTCC AGGTCCTGGG CACGATGGTC GATTTCTCGA CCTTCGAACC CGATCCGAAC
CGCTGA
 
Protein sequence
MAILEKHKVL EKNATLLLVF SFLVVTIGGI VEIAPLFYLQ NTIEKVQGMR PYTPLELKGR 
DIYVREGCYV CHSQMIRPMR DEVERYGHYS LAAESMYDHP FQWGSKRTGP DLARVGGRYS
DEWHLDHLVD PQAVVPESIM PKYGFLLNRQ VDASNMQQRL KTDALVGVPY DDAMIAAAVE
DFRAQADPDA DASGLEERYP GAQQRNFDRR PGVSEMDALI AYLQVLGTMV DFSTFEPDPN
R