Gene Pden_1841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1841 
Symbol 
ID4581025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1839899 
End bp1840057 
Gene Length159 bp 
Protein Length52 aa 
Translation table11 
GC content62% 
IMG OID639769161 
Productcytochrome oxidase maturation protein, cbb3-type 
Protein accessionYP_915634 
Protein GI119384578 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3197] Uncharacterized protein, possibly involved in nitrogen fixation 
TIGRFAM ID[TIGR00847] cytochrome oxidase maturation protein, cbb3-type 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.752345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.421653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCC TCGGCCTTCT GATTCCGGTT TCCCTGGGTC TTGGCGGGCT TGGCCTGCTG 
GCCTTCATCT GGTCGCTGCG CGGTCGGCAA TACGACGATC CCAAAGGCGA TGCCGAGCGC
ATCCTCAGCT CGGAATGGGA CGATCACCCG AAGCCCTGA
 
Protein sequence
MEILGLLIPV SLGLGGLGLL AFIWSLRGRQ YDDPKGDAER ILSSEWDDHP KP