| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1830 |
|---|
| Symbol | |
|---|
| ID | 4578542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1828317 |
|---|
| End bp | 1828601 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639769150 |
|---|
| Product | sterol-binding domain-containing protein |
|---|
| Protein accession | YP_915623 |
|---|
| Protein GI | 119384567 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3255] Putative sterol carrier protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.955664 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.546759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAG TGGTCGAGGC AGCCGTGGCC GCACTGGACG AGAAGGCCAA GGGCTTCGAC
GGCACCGCCA AATTCGTCAT CGAGGGCGAG GGGTCGGTCT ATATCGACGC CGATGGCGCC
CGCGCCGCCG ACGACGAAGC CGAGGTGACG CTGACCGCCA GCCGCGAGAC CTTCGAGGGC
CTGCTGTCGG GCGACGTGAA CCCGACCACC GCCTTCATGA CCGGCAAGCT GCGGGTCGAC
GGCTCGATGG GCATGGCGAT GAAGCTGGGG GCGCTGCTCT CGTAA
|
|---|
| Protein sequence | MSKVVEAAVA ALDEKAKGFD GTAKFVIEGE GSVYIDADGA RAADDEAEVT LTASRETFEG
LLSGDVNPTT AFMTGKLRVD GSMGMAMKLG ALLS
|
|---|
| |