| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1827 |
|---|
| Symbol | |
|---|
| ID | 4578539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1824335 |
|---|
| End bp | 1824604 |
|---|
| Gene Length | 270 bp |
|---|
| Protein Length | 89 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639769147 |
|---|
| Product | RNA-binding S4 domain-containing protein |
|---|
| Protein accession | YP_915620 |
|---|
| Protein GI | 119384564 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000868037 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.351536 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGG AGGCGGCCGG GGCGATCCGG CTCGACCGCT GGCTGCATCA CGCGCGGCTG
TTCAAGACCC GCACCCTGGC CGCCGACGCG ATCGGTGCCG GGGGCATCCG GGTGAACGGG
CAGCCTTGCA GCAAGCCGGC GCAGGCGGTC AGGGGCGGCG ATACTGTCAC CGTATCGGCC
CATGGCCGGG TGCGGGTGCT GCGGGTCCGG CTATTGGGCG AGCGGCGCGG CCCGGCCAGC
GAGGCGGCGA CGCTTTACGA GGAACTCTAG
|
|---|
| Protein sequence | MSQEAAGAIR LDRWLHHARL FKTRTLAADA IGAGGIRVNG QPCSKPAQAV RGGDTVTVSA
HGRVRVLRVR LLGERRGPAS EAATLYEEL
|
|---|
| |