| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1820 |
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| Symbol | ispG |
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| ID | 4578532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1816643 |
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| End bp | 1817767 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639769140 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_915613 |
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| Protein GI | 119384557 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.193573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.119595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCACA ATCCGATCCG CCCCTGGCGC AATATCGATC GGCGCAACTC GCGCCGGATC
ATGGTCGGCA ACGTGCCGGT TGGGGGCGAT GCACCGATCA GCGTGCAGAC CATGACCAAC
ACCGACACGT CGGACGTGCG CGCGACGCTG GACCAGATCA TCCGTGCCGC CGATGTGGGT
GCCGATATCG TCCGCGTCTC GACCCCGGAC CAGGATTCGA CCCGTGCGCT GCGCGAGATC
TGCCGCGAAA GCCCGGTGCC CATCGTGGCC GACATCCATT TCCACTACAA GCGTGCCATC
GAGGCCGCCG AGGCCGGCGC CGCCTGCCTG CGCATCAATC CCGGCAATAT CGGCGATGCG
ACCCGGGTGC GCGAGGTGAT CAAGGCCGCG CGCGACCACG GCTGCTCGAT CCGCATCGGC
GTGAATGCCG GCAGCCTGGA AAAGCACCTG CTGGAGAAAT ACGGCGAGCC CTGCCCGGAT
GCGATGGTGG AATCCGGCCT CGACCATATC CGCATCCTGC AGGACAACGA TTTCCACGAA
TTCAAGATCA GCGTGAAGGC CAGCGACGTC TTCCTTGCCG CCGCCGCCTA TCAGCAGCTG
GCCGACGCCA CCGACGCCCC GATCCATCTG GGCATCACCG AGGCGGGCGG GCTGACGGCC
GGCACGGTGA AATCCGCCAT CGGGCTTGGC AACCTTCTGT GGATGGGCAT CGGCGACACG
ATCCGCGTCA GCCTTTCCGC CGATCCGGTC GAAGAGGTCA AGGTCGGCTT CGAGATCCTG
AAATCGCTGG GCCTGCGCAC CCGCGGCGTG CAGATCATCT CGTGCCCAAG CTGCGCGCGG
CAGGGTTTCG ACGTGATCAA GACGGTCGAG ATCCTGGAGA AGCGCCTCGA GCATATCAAG
ACACCGATGA GCCTGTCGAT CATCGGCTGC GTGGTGAACG GCCCGGGCGA GGCGCTGATG
ACCGATATCG GCTTCACCGG CGGCGGGGCG GGGTCGGGCA TGGTCTATCT GGCCGGCAAG
CAGAACCACA AGATGACGAA CGCCCAGATG GTCGACCATA TCGTCGAACT GGTCGAGAAA
CGCGCCGCCG AGATCGAGGC CGCGCAATCC GCCGCTGCCG AATAA
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| Protein sequence | MSHNPIRPWR NIDRRNSRRI MVGNVPVGGD APISVQTMTN TDTSDVRATL DQIIRAADVG
ADIVRVSTPD QDSTRALREI CRESPVPIVA DIHFHYKRAI EAAEAGAACL RINPGNIGDA
TRVREVIKAA RDHGCSIRIG VNAGSLEKHL LEKYGEPCPD AMVESGLDHI RILQDNDFHE
FKISVKASDV FLAAAAYQQL ADATDAPIHL GITEAGGLTA GTVKSAIGLG NLLWMGIGDT
IRVSLSADPV EEVKVGFEIL KSLGLRTRGV QIISCPSCAR QGFDVIKTVE ILEKRLEHIK
TPMSLSIIGC VVNGPGEALM TDIGFTGGGA GSGMVYLAGK QNHKMTNAQM VDHIVELVEK
RAAEIEAAQS AAAE
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