| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1806 |
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| Symbol | |
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| ID | 4580506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1798892 |
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| End bp | 1800031 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639769126 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_915599 |
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| Protein GI | 119384543 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.136814 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCT ATATCCTGCG GCGCTTGTTG CTGATCATAC CCACGCTGAT CGGCATCATG
CTGGTCAACT TCACGCTGAC GCAATTCGTC CCCGGCGGCC CGATCGAGCA GGTGATCGCC
CGCGTCCAGG GCGAGGGCGA CGCGCTGCGC AACATCACCG GCGGCGCCGG CGACGCACCC
CAGAATACCG AATATGCCGG CGCCCGCGGC ATCCCGCCCG AATTGCTGGA CCAGTTGGAA
GTGCAGATGG GCTTTGCCAA GATCGTCTGC ACCCCCGCGC ATCAGGGTGA GCCGGACCTG
AAATCCCCCG ACTGCGCCAA GGAAAAGATC GGCGCGGCCG AACGTTTCCT GATCATGCTG
GGCAATTATG TCCGCTTCGA TTTCGGCATC AGCTTCTTCC GCTCGATCTC GGTCATCGAC
CTGGTGCTGG AAAAGATGCC GGTCTCGATC ACGCTGGGGC TGTGGTCCAC GCTGATCGCC
TATCTGATCT CGATCCCGCT GGGCATCCGC AAGGCGGTCA GGAACGGCAC CTCCTTCGAC
ACCTGGACCT CGGGCGCGAT CATCGTGGGC TATGCCATCC CGGCCTTCCT GTTCGCGGTC
CTGCTGATGG TGCTGTTCGC GGGCGGCAGC TATTGGCAGA TCTTTCCGCT GCGCGGGCTC
ACCTCGGACA ACTGGTCCGA CCTGAGCCTT TGGGGCAAGG TCAAGGACTA TCTGTGGCAC
ATCGCCCTGC CGGTGACCGC CACCACCATT TCCAGCTTTG CCACGCTGAC GCTGCTGACC
AAGAACAGCT TCCTGGACGA GATCAACAAG CAATATGTCA TGACCGCCCG CGCCAAGGGC
CTGACCGAGG GGCGGGTGCT TTACGGCCAT GTCTTCCGCA ATGCGATGCT GATCGTGATC
GCCGGGTTTC CGTCCATGTT CCTGGGCGTG TTCTTCGGCT CGTCGATCCT GATCGAGACG
ATCTTTTCGC TGGACGGGCT GGGCCGGCTG GGCTTCGAGG CCGCCGTGCA GCGCGACTAT
CCGGTGATCT TCGGCACGCT TTACGTCTTT GGCCTCATGG GCCTGGTGGT CGGGATCCTG
TCGGACCTGA TGTATGTGCT GGTCGATCCG CGCATCGATT TCGAGCGGAG GGCCGGCTGA
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| Protein sequence | MAAYILRRLL LIIPTLIGIM LVNFTLTQFV PGGPIEQVIA RVQGEGDALR NITGGAGDAP
QNTEYAGARG IPPELLDQLE VQMGFAKIVC TPAHQGEPDL KSPDCAKEKI GAAERFLIML
GNYVRFDFGI SFFRSISVID LVLEKMPVSI TLGLWSTLIA YLISIPLGIR KAVRNGTSFD
TWTSGAIIVG YAIPAFLFAV LLMVLFAGGS YWQIFPLRGL TSDNWSDLSL WGKVKDYLWH
IALPVTATTI SSFATLTLLT KNSFLDEINK QYVMTARAKG LTEGRVLYGH VFRNAMLIVI
AGFPSMFLGV FFGSSILIET IFSLDGLGRL GFEAAVQRDY PVIFGTLYVF GLMGLVVGIL
SDLMYVLVDP RIDFERRAG
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