Gene Pden_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1786 
Symbol 
ID4580970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1780107 
End bp1780469 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content70% 
IMG OID639769104 
Productresponse regulator receiver protein 
Protein accessionYP_915579 
Protein GI119384523 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00311899 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCAA GTGTCGATGT GCTGCTGATC GAAGACGAAC CCAGCATCGC CGAGGCCGTC 
CGCTTCATCC TGTCGCGCGA GGGCTGGCAA TGCGAGCAAT GGCTCGAAGG CAACGGCGCC
CTCCAGCGCA TCCGCGCGCT TGCGCCGCGG TTGGTGATCC TGGACGTGAT GCTGCCCGGC
CGCAGCGGCG CCGAGGTGCT GGCCGACCTG CGCGCCGATC CCGAGTTGCG GACGCTGCCG
GTGCTGCTGC TCAGCGCCCG CGGCATGGCG AACCTGCCCC AGGGCGCGGA CCGGACGCTT
GCCAAGCCCT TTGCCAATGC CGATCTGCGC GCCATGGTGC GCGAGCTTCT GGACGCGGGC
TGA
 
Protein sequence
MTASVDVLLI EDEPSIAEAV RFILSREGWQ CEQWLEGNGA LQRIRALAPR LVILDVMLPG 
RSGAEVLADL RADPELRTLP VLLLSARGMA NLPQGADRTL AKPFANADLR AMVRELLDAG