Gene Pden_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1772 
Symbol 
ID4580936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1760831 
End bp1761697 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID639769087 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_915565 
Protein GI119384509 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.32284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGCG CCGAGAAAGC CCTGCGGATC ATCACCGCCG CCAATCCCTC GCCCTTTACC 
GGGCCGGGCA CCAACACCTT CCTGCTGGGA CACGAGCGAA TCGCCGTGAT CGACCCCGGC
CCGGACCTTG CCGCGCATCG CCAGGCGATC CTGTCCGCCG CAGGGCCCGG CCGCATCAGC
CATATCTTCG TGACCCATGC GCATCTGGAC CATTCCGGCG GTGCCCGCGC GCTGGCACAG
GCGACGGGCG CGCCGATCCT GGGCTTCGGC CCGGCCGAGG CGGGCCGTTC GGCGGTGATG
GAGCGGCTGG CGCGCGAGGG CGCGATCGAC GGCGGCGAGG GCTTGGACCG CGACTTCGCC
CCCGACATCG CGCTGGACGA CGGCGCGGTG GTCGAGACCG ACGAATGGCG CCTGACCGCG
CTGCACACGC CGGGTCATTT CGCCGGCCAC CTGGCCTTTC GCCAGGACGA GACGATCTTT
TGCGGCGACG TGGTGATGGG CTGGTCCTCG ACCATCATCT CGCCGCCGGA CGGCGATCTG
GCGGATTACT TCCGCTCGCT GGCGCGGCTC GATTCGGCGG GCGCGCGGCT GTTGCTGCCG
GCGCATGGCG CGGCGGTGCG CGATCCCTCG GGGCGTCTGG CCGAGCTGGC CGCGCATCGG
CGCGAGCGCA CGGTGCAGAT CCTTGCCGCG CTGCGCGACG GCCCCGCCAC GGCCGAGACC
CTTGCCCGGC GCATCTACCA GATCCCGCCG GCGATGATTC CGGCCGCGAT GCGCAACGTG
CTGGCGCATC TGATCGCGCT TTCCGAGCTT GGCGCGGTTT CGACCCCCGG CCCGATCGCC
TCGGATTCGG TCTTTTCCGG GCATTGA
 
Protein sequence
MTSAEKALRI ITAANPSPFT GPGTNTFLLG HERIAVIDPG PDLAAHRQAI LSAAGPGRIS 
HIFVTHAHLD HSGGARALAQ ATGAPILGFG PAEAGRSAVM ERLAREGAID GGEGLDRDFA
PDIALDDGAV VETDEWRLTA LHTPGHFAGH LAFRQDETIF CGDVVMGWSS TIISPPDGDL
ADYFRSLARL DSAGARLLLP AHGAAVRDPS GRLAELAAHR RERTVQILAA LRDGPATAET
LARRIYQIPP AMIPAAMRNV LAHLIALSEL GAVSTPGPIA SDSVFSGH