Gene Pden_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1769 
Symbol 
ID4580933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1757635 
End bp1758372 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID639769084 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_915562 
Protein GI119384506 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.485655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATC TGACGGGTAA GAATGCCCTT GTGACCGGCG CGTCGGGCGG GATCGGCGGG 
GCGGTGGCCG AGGCATTGCA CGCCGCCGGC GCCACCGTGG CATTGTCGGG CACGCGCGAG
GCGCCGCTGC GGGAACTGGC CGAGAAGCTG GGCGCGCGCG CGCATGTCGT CACCGCCAAC
CTGGCCGACG CGGCGGCGGT CGAGGCGCTG CCCAAGGCGG CGGCCGAGGC CATGGGCTCG
GTCGATATCC TGGTCAACAA TGCCGGGATC ACCCGCGACA ACCTGTTCAT GCGCATGTCC
GACGAGGAAT GGGCGCAGGT GGTCGAGGTC AACCTGACCT CGAGTTTCCG GCTGTGCCGG
GGGGTCTTGC GTGGCATGAT GAAGGCGCGC TGGGGCCGGA TCGTGAACAT CGGCTCGGTC
GTGGGCGCCA CGGGCAATCC GGGGCAGGCC AATTATGCCG CCGCCAAGGC GGGCCTCGTC
GGCATGTCGA AGAGCCTGGC CTATGAGGTC GCCTCGCGCG GGATCACGGT GAACTGCGTG
GCGCCGGGCT TCATCGAGAC GGCGATGACC GACAAGCTGA ACGACGAGCA GAAGGGCCGG
ATCCTGGCGC AAATTCCCGC CGGCCGCATG GGTTCGGCCC AGGAAATCGC CGGCGCGGTG
CTGTATCTGG CCAGCCCCGA GGCGGGCTAT GTCACCGGCG CCACGCTACA TGTCAACGGC
GGCATGGCGA TGATCTGA
 
Protein sequence
MFDLTGKNAL VTGASGGIGG AVAEALHAAG ATVALSGTRE APLRELAEKL GARAHVVTAN 
LADAAAVEAL PKAAAEAMGS VDILVNNAGI TRDNLFMRMS DEEWAQVVEV NLTSSFRLCR
GVLRGMMKAR WGRIVNIGSV VGATGNPGQA NYAAAKAGLV GMSKSLAYEV ASRGITVNCV
APGFIETAMT DKLNDEQKGR ILAQIPAGRM GSAQEIAGAV LYLASPEAGY VTGATLHVNG
GMAMI