Gene Pden_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1750 
Symbol 
ID4581260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1738430 
End bp1738978 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content69% 
IMG OID639769065 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_915543 
Protein GI119384487 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0410351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCGC GCGAGGACAT GCTGGCCGGC CGGCCCTATA ACCCCGGCGA CGGCGAGTTG 
GTGGCGATGC GCAAGGCCGC GCAGGGATTG ATGCGCGACT ACAATAACAC GATCATCGGC
GACAAGACCC GCGCCCGCAC GCTGACCCAG CTGCTGGGCA CGTGGAACGG CGCCGTGATC
CGCACCCCCT TCCATGTCGA TTACGGCAAG CATATCCATT TCGGGCCGGA TTGCTTCGTG
AATTACGGCT GCTTCTTCAT GGATATCTGC GAGATCCGCA TCGGCGCGCG CTGCCAGTTC
GGCACCGCCG TGCAACTGCT GACCGAGGAC CGGCCGCGCG ACCGCGAAAG CCGGGCCACG
GGCGAGGAAT GGGGCAAGCC CATCGCCATC GGCGACGATG TCTGGGTGGG CGGCGGCGCA
ATCGTCCTGC CGGGCGTGTC CATCGGCGAC GGCGCCATCG TCGGCGCCGG CGCGGTGGTG
ACGCGCGACG TGGCGCCGGG GACCACCGTG GTCGGCAACC CGGCCCGTCC GCTGCCGCCG
AAATCCTGA
 
Protein sequence
MTAREDMLAG RPYNPGDGEL VAMRKAAQGL MRDYNNTIIG DKTRARTLTQ LLGTWNGAVI 
RTPFHVDYGK HIHFGPDCFV NYGCFFMDIC EIRIGARCQF GTAVQLLTED RPRDRESRAT
GEEWGKPIAI GDDVWVGGGA IVLPGVSIGD GAIVGAGAVV TRDVAPGTTV VGNPARPLPP
KS