Gene Pden_1748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1748 
Symbol 
ID4581258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1737281 
End bp1738009 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content67% 
IMG OID639769063 
ProductMltA-interacting MipA family protein 
Protein accessionYP_915541 
Protein GI119384485 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0833068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGGA TTGCCGCGCT TGCGCTTGTT GCCGCCACCG CCCTGAGCCA GCCCGCGCTG 
GCGCAGTCGC TGGGGCGCGA GCTTTCGTTC GATGCCGGGC TGGGCGTGAA ATACAGTCCC
GAATTCATGG GTTCGGACAA TCTGGATGCC TCGCCCTGGC TCATCCTGCG CAATGCCGAT
GCCGACCGCG GCAAGGACGA CGGGTTCTCG ATCCTGCCCT CGCTGAATTA TGTCGGCAAG
CGCGATGCCG GCGATTCCGA GGATCTGCGC GGCATGGAGG ATATCAGCCG CGCCGGCGAG
ATCGGCGTGA AGCTGTCCTG GCGGGTGGGC GATCTGACCA GCTACGGCGC CGTCCGCAAG
GGCTTTGGCG GCCATCACGG CGTGGTGGGC GAGTTGGGCG CGAAATACCG CTTCGAGGCC
AGCGACAAGC TGACGCTGTG GACCGGGGCC GAGCTGGGCC TGGGCGACCA GGACTTCACC
GGCACCTATT TCGGCGTCGG CGAGGGAGAG GCGCTGGCCG ACCGGCCCGA ATACAATCCC
GACGGCGGTG CCTATATCGC CCGCATCAGC GTCGAGGCGC GCTATGAGTT CATGCCCGAC
ACGGCGCTGA TGGGCCGGCT GACCTATGGC CGGCTGCTGG GCGATGCCGG CGATTCGCCC
CTGGTCGAGA CGCGCAGCCA GCCTTCGATC AGCATCGGCG TGGCGCGGCG GCTGAACTTC
CGCTTCTAA
 
Protein sequence
MTRIAALALV AATALSQPAL AQSLGRELSF DAGLGVKYSP EFMGSDNLDA SPWLILRNAD 
ADRGKDDGFS ILPSLNYVGK RDAGDSEDLR GMEDISRAGE IGVKLSWRVG DLTSYGAVRK
GFGGHHGVVG ELGAKYRFEA SDKLTLWTGA ELGLGDQDFT GTYFGVGEGE ALADRPEYNP
DGGAYIARIS VEARYEFMPD TALMGRLTYG RLLGDAGDSP LVETRSQPSI SIGVARRLNF
RF