| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1739 |
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| Symbol | |
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| ID | 4581249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | + |
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| Start bp | 1728497 |
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| End bp | 1729609 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639769054 |
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| Product | ABC polyamine/opine transporter, periplasmic substrate-binding protein |
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| Protein accession | YP_915532 |
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| Protein GI | 119384476 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.124985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC AAGAACATCC AACAGGAGAG CCATCCATGA AAGAACGCCT CATCTTCACC
ACCGCACTGA CGCTGCTCGC CACCACGGCC GCGGGACAGG AGATCACCGT CATGTCCTGG
GGCGGCACTT ACGGCCAAAG CCAGGTCGAG GCCTATCACA AGCCCTTCAC CGCCAAGACC
GGCATCAAGA TCGTCTCGCT CGACAGCGAC AACCCGGCGA TCCCGGTCAA GGCGCAGGTC
GAGGCGGGCA ATGTCTCGAC CAATGTGGCC GATGTCGAAT ATGCCGACGC GATCCGGCTG
TGCGACGAGG GGCTGCTGGA GCCGATCGAC CCGGCGATCC TGCCGCCCGC ACCCGACGGC
ACCCCCGCGA CCGAGGACTT CCTGCCTCAA GGTCTCAGCG ATTGCGCGGT GGGCTCGATC
GTGTTCTCGA CGATCTTTGC CTATGACGCG ACGAAATATC CCGACGCCAA GCCGCAGACC
ATCGCCGACT TCTTCGACAC GCAGAAATTC CCCGGCAAGC GCGGGATCAA GAAGGTGCCC
AAGGCCGTTC TGGAAGTGGC ATTGATGGGC GACGGCGTGC CGGCGGACCA GGTCTACGAG
GTGCTTGGCA CCCCCGAGGG CGTCGACCGC GCCTTCGCCA AGCTCGGCAG CATCAAGAAG
GACACCGTCT GGTGGGAGGC CGGCGCACAG CCGCCGCAAC TGCTGGCCGA TGGCGAGGTG
GCGATGACCA TGGCCTATAA CGGCCGGATC TTCGGCGCCG CCGTATCCGA GGGCAAGCCC
TTCGAGATCG TCTGGGACGG GCAGGTCTAC GAATACAACC TTTTCGTCAT TCCAAAGGGC
GCCCCGAAGC AGGACGAGGC GCTGGAATTC ATCAAGTTCG CGACCGACAC CCAGCGGCTG
GCGGATCAGG CGAAATGGAT CAGCTACGGC CCGGCGCGGA AATCATCGGC CGAGCTGGTG
GGGCTCTACC AGGACGGCAA GACCGAGATG GCGCCGCATA TGCCGACCAA TCCCGACAAC
ATGAAGAACG CGCTGGGTTC GTCCTATGAG TTCTGGGTCG ACCACGAAGC GGAGCTGGTG
GAGCGCTTCA GCGCCTGGCT CAGCGCCAGT TGA
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| Protein sequence | MKKQEHPTGE PSMKERLIFT TALTLLATTA AGQEITVMSW GGTYGQSQVE AYHKPFTAKT
GIKIVSLDSD NPAIPVKAQV EAGNVSTNVA DVEYADAIRL CDEGLLEPID PAILPPAPDG
TPATEDFLPQ GLSDCAVGSI VFSTIFAYDA TKYPDAKPQT IADFFDTQKF PGKRGIKKVP
KAVLEVALMG DGVPADQVYE VLGTPEGVDR AFAKLGSIKK DTVWWEAGAQ PPQLLADGEV
AMTMAYNGRI FGAAVSEGKP FEIVWDGQVY EYNLFVIPKG APKQDEALEF IKFATDTQRL
ADQAKWISYG PARKSSAELV GLYQDGKTEM APHMPTNPDN MKNALGSSYE FWVDHEAELV
ERFSAWLSAS
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