| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1734 |
|---|
| Symbol | |
|---|
| ID | 4580996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | + |
|---|
| Start bp | 1722313 |
|---|
| End bp | 1723470 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639769048 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_915527 |
|---|
| Protein GI | 119384471 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2822] Predicted periplasmic lipoprotein involved in iron transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0725409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.221375 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCAC CCTCGAAAGG CATTTACCTG GCGATCGCGG GCGCGGCCGT GCTGGCCGTC
GCGGGCGGCG CGGCCTTCTG GTATGCGACG CAGCGGAATG CCGGCACGCA GACCGCGGCG
GACCAGCTGG TGACCGTGAA CGCCACCACT TGCGAGCCCA ATGCCATCAC CGTGCCCGGC
GGACGGCGCA GCTTCGAGAT CGTGAACGCC AGCGACCGCC CCATCGAATG GGAGATCCTG
AACGGCGTCA TGGTGGTGGC CGAGCGCGAG AACATCGCAC CCGGCTTCCG CTCAACGCTG
GAGGTGCAAC TGGCGCCGGG CGAATACGCC ATCACCTGCG GCCTGCTGTC GAACCCGCGC
GGCACGCTGA CCGTGACGCC GTCGGACGAG GCCGCGGCCG CCGCCTCGGA AGTCACGCTG
CGCAAGTTCC TGGGACCGCT GTCGGAATAC CGCGTCTATC TGGTCATGCA GGGCAATGCC
GCGGTCAAGG CCGCCGAGGC GCTGCGCGAC GCCATCACTG CGAACGATCT GGAGGCCGCG
CGCGAGGCAT GGCACCAGGC CCGCCTGCCC TATCGCCGCA TCGAGCCGCT GGCTTATCGC
TTTTCGGACC TGGAAGAGCG CATCGACGCC CGCGCCGCCT ATCTGGCCGG TCGCGAGCAG
GACCCCGCCT TCATCGGCTA TCACCGCATC GAATACGGCC TTTTCGCGGA AAACCGCACC
GAGGGGCTGG CGCCCTTTGC CGATGCGCTG GTCGCAGACC TGACCGAACT GGCCGCCCGG
CTGAAACAGG CGCCGCTGGA TCCCGGCCTG CTGATCGAGA TACCGGGCGA AAGCGCGCTT
CAGATCGCGC AGGGCCAGAT ACCGCAGGGC GAGAACCTTT ATGCCGGCAA CGACTTGCAG
GATCTTGCCG CCAGCCTTGA GGGGATCGGC AAGCTGGCCG GCCTGTTGCG GCAGGTCGTG
GCCGGGGTCG ATCCGGCGCT GGACAAGGTC ATCGAACAGG ACATGCAGGC GGCCGAGGCG
CATCTTGCCG CCATCGCGGC CGAAGCGCAC CCGACCTATG GCGATGTCCC GAAAGCCGCG
CGCGACGCGC TTGCCGCCGA CCTGACGCGG CTGTCCGAAA GCCTGCGCAA ATTGCAACCC
GCCATCGGGA TGAATTGA
|
|---|
| Protein sequence | MTSPSKGIYL AIAGAAVLAV AGGAAFWYAT QRNAGTQTAA DQLVTVNATT CEPNAITVPG
GRRSFEIVNA SDRPIEWEIL NGVMVVAERE NIAPGFRSTL EVQLAPGEYA ITCGLLSNPR
GTLTVTPSDE AAAAASEVTL RKFLGPLSEY RVYLVMQGNA AVKAAEALRD AITANDLEAA
REAWHQARLP YRRIEPLAYR FSDLEERIDA RAAYLAGREQ DPAFIGYHRI EYGLFAENRT
EGLAPFADAL VADLTELAAR LKQAPLDPGL LIEIPGESAL QIAQGQIPQG ENLYAGNDLQ
DLAASLEGIG KLAGLLRQVV AGVDPALDKV IEQDMQAAEA HLAAIAAEAH PTYGDVPKAA
RDALAADLTR LSESLRKLQP AIGMN
|
|---|
| |