Gene Pden_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1719 
Symbol 
ID4580981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1705314 
End bp1706825 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content68% 
IMG OID639769033 
Productmalonyl-CoA synthase 
Protein accessionYP_915512 
Protein GI119384456 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.982236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACA ATCTGTTCGA CCTTCTCACC GCCGGCATCA GCGATCCCGA GGCCGTGGCC 
ATCGAAACGC AGGCGGGCGA GCGCATCCGC TATGGCGACC TGATCGCCCG CAGCGGCCGC
ATGGCCAACG CGCTGGCGGC CTTCGGCGTC CAGCCCGGCG ACCGGGTGGC GGTTCAGGTC
GAGAAATCGG TGCAGGCGAT CATCCTCTAT CTCGCCACCC TGCGGGCGGG CGCGGTGTTC
CTGCCGCTGA ACACCGGCTA CACCCCCGCC GAGATCGGCT ATTTCCTGGG CGATGCCGAG
CCCCGGGTCT TTGTCTGCGA CCCCGCCCGG CAAGAGGCGC TGCGCGGGCC CACTGAGGCC
GCCGGTGCCC GCATGGTGAC GCTGGACGCC GAGGGGCGGG GCAGCCTGAC CGACGCCGCC
GATGCTGCCC CCGAGGCTTT CGCCACCGTG GCCCGCGACA GCGACGACCT GGCCGCGCTG
CTTTACACCT CGGGCACCAC CGGCCGGTCC AAGGGCGCGA TGCTGACCCA TGGCAACCTG
GTCTCGAATG CGCAGGTGTT GCGCGAGGCA TGGCGCTTTA CCGCGCAGGA CGTGCTGATC
CACGCCCTGC CGATCTTTCA CACCCACGGC CTGTTCGTCG CCACCAATGT GGTGCTGTTC
TCCGGCGCCT CGATGATCTT CCTGCCGAAA TTCGACGTCG ACCGGATATT CGAGGGGATG
GCGCGGGCGA CCGTGCTGAT GGGCGTGCCG ACCTTCTATG TCCGCCTGCT TCAGGACGAC
ATGCTGAACG CCGAGACCAC GGCCAACATG CGGCTGTTCG TCTCGGGTTC GGCGCCGCTG
CTGGCCGAGA CGCATCGCGA ATGGCAGGCC CGCACCGGCC ATGCCATCCT GGAACGCTAC
GGCATGACCG AGACGAACAT GAACGCCTCG AACCCCTATG ACGGCGAGCG CATCGCCGGC
ACCGTCGGCC TGCCGCTGCC CGGCACCGAG ATCGTCGTCA CCGACCCCGA GACCGGCGCC
GAGCTGCCGC GGGGCGAGAT CGGCATGATC GAGGTACGCG GCCCGAACGT GTTCAAGGGC
TATTGGCGCA TGCCGGAAAA GACCGCCGCC GAGCTGCGCG ACAACGGCTT TTTCATCACC
GGCGACCTGG GGAAATTCGA CGAGCGCGGC TACCTGCACA TCGTCGGCCG CGGCAAGGAC
CTGATCATCA CCGGCGGCTA CAACGTCTAT CCCAAGGAGA TCGAGACCGA GATCGACGCG
CTGCCCGGCG TGGTCGAATC CGCCGTCATC GGCCTGCCGC ATCGCGATTT CGGCGAGGGG
GTGACGGCGG TGGTCGTCCC GACCGGCAGC CCCGCCCTGA CCGAGGCCGA TGTGCTGGCC
CCGCTGGAGG GGCGGCTGGC GAAGTTCAAG CAGCCCAAGC GTGTGCTGTT CATGGACGAG
TTGCCGCGCA ACACCATGGG CAAGGTGCAG AAGAACCTGC TGCGCGACCG CTTCGCCGGG
CTTTACGACT AG
 
Protein sequence
MSDNLFDLLT AGISDPEAVA IETQAGERIR YGDLIARSGR MANALAAFGV QPGDRVAVQV 
EKSVQAIILY LATLRAGAVF LPLNTGYTPA EIGYFLGDAE PRVFVCDPAR QEALRGPTEA
AGARMVTLDA EGRGSLTDAA DAAPEAFATV ARDSDDLAAL LYTSGTTGRS KGAMLTHGNL
VSNAQVLREA WRFTAQDVLI HALPIFHTHG LFVATNVVLF SGASMIFLPK FDVDRIFEGM
ARATVLMGVP TFYVRLLQDD MLNAETTANM RLFVSGSAPL LAETHREWQA RTGHAILERY
GMTETNMNAS NPYDGERIAG TVGLPLPGTE IVVTDPETGA ELPRGEIGMI EVRGPNVFKG
YWRMPEKTAA ELRDNGFFIT GDLGKFDERG YLHIVGRGKD LIITGGYNVY PKEIETEIDA
LPGVVESAVI GLPHRDFGEG VTAVVVPTGS PALTEADVLA PLEGRLAKFK QPKRVLFMDE
LPRNTMGKVQ KNLLRDRFAG LYD