Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1715 |
Symbol | |
ID | 4581341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1701363 |
End bp | 1702067 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639769029 |
Product | ABC transporter related |
Protein accession | YP_915508 |
Protein GI | 119384452 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0199922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGC CGCTTCTGAA CGTCCGCGAC CTGCATGCCT GGTACGGGGA AAGCCACGTC CTGCACGGCG TGAACCTGAC CGTGGCCGAG GGCGAGATGA TCTGCATCCT GGGCCGCAAC GGCATGGGCA AGACCACGAC GCTGCGCAGC ATCATGGGCA TCCTGCGCAA GCGCAGCGGC CGGATCGAGT TCGCCGGGCG GGACATGACG GCGGTGGCCC TGCACCAGAC CGCGCGGGCG GGCCTGGGCT TCGTGCCCGA GGAGCGCGGC ATCTTCGCCA GCCTCTCGGT CGAGGAGAAC CTGATGCTGC CGCCGAAGGT CGCCGAGGGC GGCATGTCGG TCGAGGAGAT CTACGACCTG TTCCCGAACC TCAAGGAACG CCGCAACAGC CAGGGCACCA AGCTGTCGGG GGGCGAGCAG CAGATGCTGG CCATGGCGCG CATCCTGCGC ACCGGGGCGC GCTGCCTTTT GCTGGACGAG CCGACCGAGG GGCTGGCGCC GGTCATCATC CAGGCCATCG GCGAGGTGCT GCAAAAGCTG AAGGGGCGCG GCATGACCGT GGTGCTGGTC GAGCAGAACT TCCGCTTTGC CGCCAAGGTC GCCGACCGCT TCTACCTGAT GGATCACGGC CGGATGACGG CGGAATTCCC GGTCGCCGAA CTGCCGGCGC AGATGGACAT GCTGCATCGG GAACTGGGGG TGTGA
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Protein sequence | MSAPLLNVRD LHAWYGESHV LHGVNLTVAE GEMICILGRN GMGKTTTLRS IMGILRKRSG RIEFAGRDMT AVALHQTARA GLGFVPEERG IFASLSVEEN LMLPPKVAEG GMSVEEIYDL FPNLKERRNS QGTKLSGGEQ QMLAMARILR TGARCLLLDE PTEGLAPVII QAIGEVLQKL KGRGMTVVLV EQNFRFAAKV ADRFYLMDHG RMTAEFPVAE LPAQMDMLHR ELGV
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