Gene Pden_1715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1715 
Symbol 
ID4581341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1701363 
End bp1702067 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content68% 
IMG OID639769029 
ProductABC transporter related 
Protein accessionYP_915508 
Protein GI119384452 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0199922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGC CGCTTCTGAA CGTCCGCGAC CTGCATGCCT GGTACGGGGA AAGCCACGTC 
CTGCACGGCG TGAACCTGAC CGTGGCCGAG GGCGAGATGA TCTGCATCCT GGGCCGCAAC
GGCATGGGCA AGACCACGAC GCTGCGCAGC ATCATGGGCA TCCTGCGCAA GCGCAGCGGC
CGGATCGAGT TCGCCGGGCG GGACATGACG GCGGTGGCCC TGCACCAGAC CGCGCGGGCG
GGCCTGGGCT TCGTGCCCGA GGAGCGCGGC ATCTTCGCCA GCCTCTCGGT CGAGGAGAAC
CTGATGCTGC CGCCGAAGGT CGCCGAGGGC GGCATGTCGG TCGAGGAGAT CTACGACCTG
TTCCCGAACC TCAAGGAACG CCGCAACAGC CAGGGCACCA AGCTGTCGGG GGGCGAGCAG
CAGATGCTGG CCATGGCGCG CATCCTGCGC ACCGGGGCGC GCTGCCTTTT GCTGGACGAG
CCGACCGAGG GGCTGGCGCC GGTCATCATC CAGGCCATCG GCGAGGTGCT GCAAAAGCTG
AAGGGGCGCG GCATGACCGT GGTGCTGGTC GAGCAGAACT TCCGCTTTGC CGCCAAGGTC
GCCGACCGCT TCTACCTGAT GGATCACGGC CGGATGACGG CGGAATTCCC GGTCGCCGAA
CTGCCGGCGC AGATGGACAT GCTGCATCGG GAACTGGGGG TGTGA
 
Protein sequence
MSAPLLNVRD LHAWYGESHV LHGVNLTVAE GEMICILGRN GMGKTTTLRS IMGILRKRSG 
RIEFAGRDMT AVALHQTARA GLGFVPEERG IFASLSVEEN LMLPPKVAEG GMSVEEIYDL
FPNLKERRNS QGTKLSGGEQ QMLAMARILR TGARCLLLDE PTEGLAPVII QAIGEVLQKL
KGRGMTVVLV EQNFRFAAKV ADRFYLMDHG RMTAEFPVAE LPAQMDMLHR ELGV