| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1684 |
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| Symbol | |
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| ID | 4580092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1666620 |
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| End bp | 1667561 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639768998 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_915477 |
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| Protein GI | 119384421 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.181861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.351536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAT TTCTGCTGAC GACCGCCTGT GCCGTCACGG TCTCGGGCGC GGCCATGGCC
GAGAATATCG GCGTGAGCAT GGCGCTGTTC GACGACAATT TCCTGACCGT GCTGCGCAAC
GGCATGCAGG AGCATGCGGC ATCGCTGGAC GGCGTGACGA TCCAGATCGA CGATGCGCAG
AACGACGTCG GCAAGCAGCT GAACCAGATC GAGAACTTCG TCGCCTCGGG CGTCGATGCG
ATCATCGTGA ACCCGGTCGA TACCGACGCC ACCATCGCCA TGAGCGCGGC GGCGCAGAAC
GCCGGCATCC CGATGGTCTT TGTCAACCGC CAGCCGGTGA ACCTGGACAG CCTGCCCGAG
AAGCAGGCCT TCGTCGCCTC GGACGAAAAG GAATCCGGCA CGCTGGAGAC GCAGGAGATC
TGCCGCCTGC TCAAGGAACA GGGCAAGACC GAGGCCCGGG CCGTGGTGCT GATGGGCGAG
CTGTCGAACC AGGCGGCGCG GATGCGCACG CAGGACATCA AGGACGTGCT GGCCACGCCG
GAATGCGGCT TCATCAGCAT CGTCCAGGAG CAGACAGCGA ACTGGTCGCG CACCCAGGGC
GCCGACCTGG TCAGCAACTG GCTTTCGGCC GGGACCGAGT TCGACGCGGT GATCTCGAAC
AACGACGAGA TGGCGATCGG CGCGATCCAG GCGCTGAAAT CGGCGGGCCG CCCGATGGAT
GACGTGGTGA TCGGCGGCAT CGACGCGACG CAGGACGCGC TGGCGGCGAT GAAGGCCGGC
GATCTGGACG TGACGGTGTT TCAGGATGCG GCCGGGCAGG GCCACGGGGC GGTCGACACG
GCGCTGAAGC TCGCCCGTGG CGAGACGGTC GAGCAAAAGG TCTATGTGCC CTTCCAACTC
GTCACCCCCG AAAATCTGGA CGAGTTCCTT TCCAGGAACT GA
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| Protein sequence | MKAFLLTTAC AVTVSGAAMA ENIGVSMALF DDNFLTVLRN GMQEHAASLD GVTIQIDDAQ
NDVGKQLNQI ENFVASGVDA IIVNPVDTDA TIAMSAAAQN AGIPMVFVNR QPVNLDSLPE
KQAFVASDEK ESGTLETQEI CRLLKEQGKT EARAVVLMGE LSNQAARMRT QDIKDVLATP
ECGFISIVQE QTANWSRTQG ADLVSNWLSA GTEFDAVISN NDEMAIGAIQ ALKSAGRPMD
DVVIGGIDAT QDALAAMKAG DLDVTVFQDA AGQGHGAVDT ALKLARGETV EQKVYVPFQL
VTPENLDEFL SRN
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