| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1681 |
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| Symbol | |
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| ID | 4580089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1663100 |
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| End bp | 1664020 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639768995 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_915474 |
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| Protein GI | 119384418 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.351495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.526364 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGCT TGACCGCAAT GGCGCTGGTG CTGGGGCTTT CCGCCCCGGC CCTGGCCGGG
GGCACCCGGA TCGGGGTCAG CATGACCAGC TTCGACAATC CCTTCCTGAC CATCCTGCTG
AACGGCATCA AGCAGCAGGC GGCGCAGGAT GGCGCCGAGC TGATCCTCGA GGACGCGCAG
CTCGACGTCG CCCGCCAGCA GAACCAGGTG CAGAACTTCA TCGCCAATGG CGTCGATGCG
ATCATCGTCA ACGCCGTCGA CGGCGCCGCC ACTCCGGCGA TGACGCAGAT GGCGATCCAG
GCCGGCGTGC CGCTGGTCTA TGTCAACCAC CCGCCGATCG GCCATGAGGC GCTGCCCAAG
GGCACCAGCT TCGTCGGCTC GGACGAGGTG GAAAGCGGCA CCATGCAGAC GCGCGAGGTC
TGCCGGATGC TGGGCGGCAA GGGCAACGTG ATGGTGCTGA TGGGGCCGCT GGAGAACGAG
GCCTCGGCCA TCCGCACCCG CGACATCGAA GAGGTGATCG CGACCCCGGA ATGCTCGGGC
ATGACCATCG TCGACAGGCA GGTCGGCAAC TGGAACCGCA CCCAGGGGCA GGACATCACC
ACCAACTGGC TGAGCTCGGG CATCGCCTTC GACGCCATCA TCTCGAACAA TGACGAGATG
GCCATCGGCG CCATCCAGTC GCTGAAGGCG GCGGGCGTGG CGATGGACAA GGTCGTCGTC
GCCGGCATCG ACGCGACGCC CGACGGCCTT TCGGCGATGC GGGCCGGCGA CCTGGACGTC
ACCGTCTACC AGAACGCCAC CCGTCAGGGC GAGGTCGCGG TCCAGACCGC CATCGCCATG
GCGGGGGGCG AAACGCCCGA ACGCAATATC TGGGTGCCCT TCGAGCCCGT CACCCCCGAG
AACCTCTCGA ACTACGAGTA A
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| Protein sequence | MKGLTAMALV LGLSAPALAG GTRIGVSMTS FDNPFLTILL NGIKQQAAQD GAELILEDAQ
LDVARQQNQV QNFIANGVDA IIVNAVDGAA TPAMTQMAIQ AGVPLVYVNH PPIGHEALPK
GTSFVGSDEV ESGTMQTREV CRMLGGKGNV MVLMGPLENE ASAIRTRDIE EVIATPECSG
MTIVDRQVGN WNRTQGQDIT TNWLSSGIAF DAIISNNDEM AIGAIQSLKA AGVAMDKVVV
AGIDATPDGL SAMRAGDLDV TVYQNATRQG EVAVQTAIAM AGGETPERNI WVPFEPVTPE
NLSNYE
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