| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1676 |
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| Symbol | |
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| ID | 4579830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1657333 |
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| End bp | 1659240 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768990 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_915469 |
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| Protein GI | 119384413 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0524] Sugar kinases, ribokinase family
[COG3892] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.20646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.588931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGGA CGTTGGACGT CATCACCATC GGCCGCTCTT CGGTCGACCT TTACGGCGCG
CAGATCGGGG GCCGGCTCGA AGACATGCGG TCCTTCAGCA AATATGTCGG CGGCTCGCCC
ACCAACATGG CCTGCGGCAC GGCGCGGCTG GGGCTGCGCT CGGCACTGAT CACCCGGGTG
GGCGACGAGC ATATGGGCCG CTTCCTGCGC GAGGAACTGG CGCGCGAGGG TGTCGATGTG
CGCGGCGTCG CGACCGACCC CGAACGGCTG ACGGCGCTTG TCCTGCTGGG CATTCGCGAC
GAGGACAGCT TTCCGCTGAT CTTCTATCGC GAGAATTGCG CCGACATGGC GCTGTGCGAG
GATGACATCG ATGAGGGGCT GATCGCCGAA GCGCGCTCCG TGGTCGCCAC CGGCACGCAT
CTGAGCCATC CGCGCACCGA GGCGGCGGTC CTCAAGGCGC TGCGCCTGGC GCGCGAAGCG
GGGGGGCAGA CGGCGCTGGA CATCGACTAT CGCCCCAACC TCTGGGGGCT CTCCGGCCAT
GGCGACGGCG AGAACCGCTT TATCGCCAGC GACAGCGTGA CGGCCAAGCT GCAGGCGCAT
CTGCCGCTTT TCGACCTGAT CGTCGGCACC GAGGAAGAGT TCCATATCGC CGGCGGCTCG
ACCGACACGC TTGCGGCGCT GCGGGCCGTC CGCGCCCTGA CGCCTGCGGT GCTGGTCTGC
AAGCGCGGCG CGGCGGGTGC GGTGGCCTTT ACCGGCGCCG TCGAGGGCTG GGACAGCGGC
GAGACCGGGC CGGGCTTCCC GATCGAGGTC TTCAACGTGC TGGGTGCCGG CGACGGCTTC
ATGTCCGGGC TGCTCAAGGG CTGGCTCGAC GGCGAGCCCT GGCCCCGGGC GCTGGAATAC
GCCAATGCCT GCGGCGCCTT TGCCGTCAGC CGGCATGGCT GCACGCCCGC CTATCCCTCG
CTGGCCGAGC TGGAGTTCTT TCTCAAGCGC GGCATCCGCG AGCGGGCGCT GCGCAAGGAT
GCCGAGCTTG AGCGCATCCA CCGCGCCACC AACCTGCATC CGCTGCAAGG CGACATCCGC
GCCTTTGCCT TCGATCACCG CATCCAGTTG GAAGAGATGC AGGGCGCGAC GCCCGAGCGG
ATCGGCGCCT TCAAGCGGCT GTGCCTGAAG GCCGCGCTGG CGGTGCAGGA CGGCCGCCCG
GGCCATGGCA TCCTCTGCGA CGACCGGCTG GGACGGGCGG CGCTGCATGC CGCGGCCGGC
ACCGGGCTCT GGGTCGGGCG GCCCTGCGAA TGGCCGGGCT CGCGTCCCCT GCGGCTGGAG
CCGGAGCTGG GCGCGGCCTG CGAGGGGCTG ATGGAATGGC CGGCGGGGCA GGCGGTCAAG
GTGCTGTGCT TCTGCCATCC CGGCGACGAC GCGGCGACGC GCGCGGACCA GGAGGCGACC
GTCACCCGGC TTTATCAGGC GGCGCGGGCC AATGACCTGG AATTCCTGCT GGAGATCATC
CCCTCCAAGG TCGGGCCGGT GGATGACGGG ACCACGGCGG CGCTGATCCG GCGCTGGTAC
GAGATCGGCG TCTATCCCGA CTGGTGGAAG CTGGAACCGC TGCAATCCGA TGCCGCCTGG
CATCAGGCGG TGGAGGCGAT CCGGGCGCAT GATCCCTGGC TGCGCGGCAT CGTCGTGCTG
GGGCTGGACG CGCCCGAGGC CGAACTGGCG GCCAGTTTCG AAAAGGCGGC GCGGCACGAC
CTGGTCAGGG GCTTTGCCGT CGGCCGGACA ATCTTCGGCG ATGTGGCGCG CGACTGGCTC
GCCGGGCGCC GCACCGACGA CGAGGCCGTG GCCGAGATGG GCCGGCGCTA TGGCCGCCTT
TGCGCGCTTT GGGACCGGGC CCGCGCGGCC GCGAAGGTGG CGGCATGA
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| Protein sequence | MSRTLDVITI GRSSVDLYGA QIGGRLEDMR SFSKYVGGSP TNMACGTARL GLRSALITRV
GDEHMGRFLR EELAREGVDV RGVATDPERL TALVLLGIRD EDSFPLIFYR ENCADMALCE
DDIDEGLIAE ARSVVATGTH LSHPRTEAAV LKALRLAREA GGQTALDIDY RPNLWGLSGH
GDGENRFIAS DSVTAKLQAH LPLFDLIVGT EEEFHIAGGS TDTLAALRAV RALTPAVLVC
KRGAAGAVAF TGAVEGWDSG ETGPGFPIEV FNVLGAGDGF MSGLLKGWLD GEPWPRALEY
ANACGAFAVS RHGCTPAYPS LAELEFFLKR GIRERALRKD AELERIHRAT NLHPLQGDIR
AFAFDHRIQL EEMQGATPER IGAFKRLCLK AALAVQDGRP GHGILCDDRL GRAALHAAAG
TGLWVGRPCE WPGSRPLRLE PELGAACEGL MEWPAGQAVK VLCFCHPGDD AATRADQEAT
VTRLYQAARA NDLEFLLEII PSKVGPVDDG TTAALIRRWY EIGVYPDWWK LEPLQSDAAW
HQAVEAIRAH DPWLRGIVVL GLDAPEAELA ASFEKAARHD LVRGFAVGRT IFGDVARDWL
AGRRTDDEAV AEMGRRYGRL CALWDRARAA AKVAA
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