Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1671 |
Symbol | |
ID | 4579825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | - |
Start bp | 1651711 |
End bp | 1653327 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639768985 |
Product | extracellular solute-binding protein |
Protein accession | YP_915464 |
Protein GI | 119384408 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.901467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGGCA TTATGTCGTT CTTCTCCACC CGCATGCTCG CGGCGTCGGC CTTTGCGCTG ATGGCTGCGG CACCGCTGCA TGCCAAGACA TTCGTCTATT GCTCGGAAGG TTCGCCCGAG GGCTTCGACG CGGCGCCCTA TACATCGGGC ACCACCTTCG ATGCCTCTGG CCACGCGGTC TACAACCGCC TGGTGCAGTT CAAGCCCGGC ACCACCGAGA TCGAGCCCGC GCTGGCCGAA AGCTGGGACG TGTCCGAGGA TGGACTGGAA TACACCTTCC ACCTGCGCCA GGGCGTGAAG TTCCACTCCA ACGACAAGTT CACGCCCTCG CGCGATTTCA ACGCCGACGA CGTGATCTTC ACCTTCGAGC GCCAGGCCAG CGCCGACCAT CCCTGGCACG AATACATCCC CGGCATCACC TACGAGTATT ACTCGTCGAT GGAGATGGAC AAGCTGATCA AGTCCATCGA AAAGGTCGAC GACCACACGG TCAAGTTCAC CCTGAGCCAG CCCGAGGCGC CCTTCCTCGC CAATGTGGCG ATGCCCTTCG TCTCGATCGT CTCCAAGGAA TATGCCGATA CGCTGGAAAC CGCCGGCACC CGCGAGGATC TGAACAACGC GCCGATCGGC ACCGGCCCCT TCCGCTTCGT CGCCTATCAG AAGGACGCGG TGATCCGTTA CCAGAAGAAC GCCGATTACT GGGGCGAGGC GCCCAAGGTC GACGACCTGG TCTTTGCCAT CACCCCCGAC GCATCGGTGC GGCTGCAAAA GCTCAAGGCC GGCGAATGCC ACCTGATGCC CTATCCCGCG CCCGCCGACC TGGACGAGAT CCGGGCCGAT CCGAACCTCA AGCTGGACGA GCAGCCCGGC CTGAACGTGG GCTATCTGGC CTATAACACC ACCGTCGCGC CCTTCGACAA TCCGCAGGTC CGCAAGGCGC TGAACATGGC GCTGGACAAG CCGGCGCTGA TCGAGGCCGT CTATCAGGGC AATGCCGAGG TCGCCAAGAA CCCGATCCCG CCGACCATGT GGTCCTATAA CGACGCCATC GAGGACGACA AATACGACCC CGAGGCGGCC AAGGCGATGC TCGAGGAAGC CGGCGTCAAG GACCTGACCA TGGAAGTCTG GGCCATGCCG GTGCAGCGCC CCTACATGCC CAACGCCCGC CGCACGGCCG AGATGATCCA GAGCGACTTC GCCAAGATCG GCGTCAAGGT CGAGATCGTC AGCTACGAAT GGGGCGAATA CCTGAAGAAG TCGATGGAAG AGGGCCGCAA GGGCGCCGTC ATCCTGGGCT GGACCGGCGA CAACGGCGAC CCCGACAACT TCCTGTCGGT GCTGCTCAGC TGCGCGTCGG CCAATCCGGG CGGCGCGAAC CGCGCCTTCT GGTGCAACGA GGCGTTCTCG GACCTGCTGG CCAAGGCCAA GGCGAGTTCG GACCACGACG AGCGCGTGAA GCTTTACGAA GAGGCGCAGG TCATCTTCAA GCAAGAGGCG CCCTGGGCCA CGCTGGCACA TTCGACGCAA TACGTGCCGA TGGCCAAGAA CGTGACCGGC TTTGTGCAAT CGCCGCTGGG CGACTATGCC TTCGACACCG TGGACCTGAC CGAATAA
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Protein sequence | MGGIMSFFST RMLAASAFAL MAAAPLHAKT FVYCSEGSPE GFDAAPYTSG TTFDASGHAV YNRLVQFKPG TTEIEPALAE SWDVSEDGLE YTFHLRQGVK FHSNDKFTPS RDFNADDVIF TFERQASADH PWHEYIPGIT YEYYSSMEMD KLIKSIEKVD DHTVKFTLSQ PEAPFLANVA MPFVSIVSKE YADTLETAGT REDLNNAPIG TGPFRFVAYQ KDAVIRYQKN ADYWGEAPKV DDLVFAITPD ASVRLQKLKA GECHLMPYPA PADLDEIRAD PNLKLDEQPG LNVGYLAYNT TVAPFDNPQV RKALNMALDK PALIEAVYQG NAEVAKNPIP PTMWSYNDAI EDDKYDPEAA KAMLEEAGVK DLTMEVWAMP VQRPYMPNAR RTAEMIQSDF AKIGVKVEIV SYEWGEYLKK SMEEGRKGAV ILGWTGDNGD PDNFLSVLLS CASANPGGAN RAFWCNEAFS DLLAKAKASS DHDERVKLYE EAQVIFKQEA PWATLAHSTQ YVPMAKNVTG FVQSPLGDYA FDTVDLTE
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