| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1659 |
|---|
| Symbol | |
|---|
| ID | 4579813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Paracoccus denitrificans PD1222 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008686 |
|---|
| Strand | - |
|---|
| Start bp | 1641303 |
|---|
| End bp | 1642682 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639768973 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_915452 |
|---|
| Protein GI | 119384396 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.819337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCT CGATCCGCTG GCGGCTGGTG CTGGCGGGGG CGCTGGCCAT CGCGCTGGCC
CTGGCGCTGT CGGGCATGGG CCTTGCTGTG CTGTTCGAGC GCCATGTCGA GCGCGTCGCC
GTCGCCGACC TCCAGGACCG CGCGCTGGCG CTGGCCGCCA TGGTGCAGCC CGGCGGCGCG
GCCGGCGCCA GCCTGCGCGC ACCCCCCGAC GATCCGCTTT ACGACCAACC CTTCTCGGGC
CATTACTGGC AGCTCATGCT GGGCGAGGAG CTGCGCCGCT CGCGCTCGCT CTGGGATTAT
ACGCTGCCGG GCGACCAGGC CGCGCCAAGG CCGGGCCAAA GCGCGGTGCT GACGCTGCCC
GGCCCGCGGG GCGAGCCGCT GCTTGCGGTC GAGCAAAGCC TGATGGTCGG CCGCGGCCCG
GACGCGGTGC CGCTGCGCAT CGTCGTCGCC TCGGATCGGG ATGAGCTGGT GCTGGCCCGG
CGCGGTTTTC TGGGCGACCT GCTGCCCTAT CTGGGCCTCT TGGGCGCGGC GCTGCTGCTG
GCCAGCTGGG TGCAGATCAC CGTCGGGCTG CGCCCGCTTG GGCAGGTGGG TGGGCGGGTG
GCGGCGCTGG TCTCGGGTGC GCGGCCGCGC ATCGGCCAGG ACTTGCCGGC CGAGGTCGTC
CCGCTGGCGA CCCAGATCGA CAAGCTGCTG GACGCCCGCG ACCGGGAACT GGACCGCGCC
CGCCACCGCG CCGCCAACCT GGCGCATGGG TTCAAGACGC CGCTGCAGGC GCTGCTGGGC
GATGCGGCGC GGCTGCGCGG CAATGGCGAG GCCGAGATCG CCCGCAGCAT CGAAACCGTC
GTCAATCAGA TGCGCCGCCA TGTCGATCGC GAACTGGCCC GCGCCCGCAT CCAGTCGGGG
CGGAATGCGC CGGGGGGAAG CGAGCCCGGC TGGATCGCGG CCAAGCTGGT CGGCGTGCTG
CGCCGCACGC CGCTGGGCGC CGGGATCGAC TGGCGGCTTT CGGCTCCGTC CGGGCTTTGC
GCCCGCATCG ACCCCGACGA CCTGACCGAG GCGCTTGGCG CGCTGCTGGA AAACGCCATG
CGCCATGCCC GTGAAGCCGT CCAGGTCGCG GGCCGCCCCG AAGGCAACCG CGTCGTCATC
TCCGTCCAGG ACGACGGCCC CGGCGTGCCC GAGGCGGACC TGGAACGGCT GACCCGGCGC
GGCCTGAGCC TCGACCCCAG CGGCGAAGGG CAGGGCATCG GCCTGGCCGT GGTCGCCGAC
ATCGTCGATG CGGCGCAGGG CGAATTGCGA CTTGCAAACG CCCATCCCGG CTTTCTGGCC
GAGCTGCATC TCGACGCGGC ACCGCCCGAG GCGGCTTCTT CGTTCCCCAA ATACTCCTGA
|
|---|
| Protein sequence | MIRSIRWRLV LAGALAIALA LALSGMGLAV LFERHVERVA VADLQDRALA LAAMVQPGGA
AGASLRAPPD DPLYDQPFSG HYWQLMLGEE LRRSRSLWDY TLPGDQAAPR PGQSAVLTLP
GPRGEPLLAV EQSLMVGRGP DAVPLRIVVA SDRDELVLAR RGFLGDLLPY LGLLGAALLL
ASWVQITVGL RPLGQVGGRV AALVSGARPR IGQDLPAEVV PLATQIDKLL DARDRELDRA
RHRAANLAHG FKTPLQALLG DAARLRGNGE AEIARSIETV VNQMRRHVDR ELARARIQSG
RNAPGGSEPG WIAAKLVGVL RRTPLGAGID WRLSAPSGLC ARIDPDDLTE ALGALLENAM
RHAREAVQVA GRPEGNRVVI SVQDDGPGVP EADLERLTRR GLSLDPSGEG QGIGLAVVAD
IVDAAQGELR LANAHPGFLA ELHLDAAPPE AASSFPKYS
|
|---|
| |