| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1645 |
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| Symbol | |
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| ID | 4580827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1625871 |
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| End bp | 1627211 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768959 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_915438 |
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| Protein GI | 119384382 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.339353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATT ACGTCGTAGA GGTCCTGTTC GGCACCTTCG CTTTGCTGAT GGTGCTGGGC
GCACCGATCA CCGTCGCGCT TGGCGTGGCC GCACTGGCTG CCATGCTCTA TCTGGGCGAC
AACCCGATCA AGATGGTGCA GATGGCCTGG TCCTCGGTCG GGTCCTTCCC GCTGATGGCG
CTGCCTTCGT TCATCCTGGC CGGGGCGCTG ATGGAGGCCG CGGGCCTGTC GCGCCGGCTG
ATCTCGGTCG CCGAAAGCCT TGCCGGTCCG TTCACCGGCG GCCTTTCCGC CGCGACCGTC
GTCGCCTGCC TGTTCTTCGG CGCGATCTCG GGCTCGGGTC CGGCCACCAC CGCCGCCGTC
GGCATGCTGA TGATCCCCGG GATGATCCGC AACGGCTACA GCCGCGATTA CGCGGCCTCG
ACCACCGCGG CCGCGGGCGG CCTGGGCATC GTCATCCCGC CCTCGATCCC GATGATCATC
TTCGGCATCT CGGCCATGGG CATCGCGCCC GATCCGGCCG CCGTCGAGGC GCATGGCCAG
TTCCAGTCGG TCTCGATCTC GAAGATGTTC ATCGCCGGCT TCCTGCCCGG CGCGGTCATG
GCGGGCGGCC TGCTGCTGAT GAACTATGTC CGCTGCAAGC GGCGGGGCTA TCACGGTTCG
TCCGAGCCGC TGTCGCTGCG CAAGTTCATG TGCGCCTGCT ATCAGGGCTT CTGGGCGCTG
CTGGCCCCGG TGGTGATCCT GGGCGGCATC TATACCGGCA TGTTCACGCC CACCGAAGCC
GCCATCATCG CCATCTTCTA CACCCTGTTC GTCGGGATCT TCATCTACCG CGAACTGGAT
CTGGGCGAGG TCTTCAAGGC GCTCGAGGCG ACGACCTGGC TGGCCGGGCG GGTGCTTCTG
GTGCTGTTCG CCGCCACCAT CTTCGGCCGC ATCCTGGTCG AGAACAACGT CCCCGGCATC
ATCGCCGGCG GCATCCTCGG CCTGACCACC AACATCTATG CGATCTGGGC GCTGATCATC
GGCATGCTGC TGATCGTGGG CATGTTCATG GAGACGCTGG CCGCGATCAT GATCCTCGTC
CCGGTCATGC TGCCGGTGGC CTATATGGTG GGCATCGATC CGATCCACTT CGGCATCGTG
ATGATCTGCA CGCTCTCCGT CGGCTTCCAG ACCCCGCCGC TGGGCGAGAA CCTGTTCATC
GCCTCCGGCA TCTCTGGCGA GACCATCGAG AAGATCAGCG TGACCGCGCT GCCCTTCGCC
GTCGCCTCGA CCGCCGCGAT CTTCGTCATC GCCATGTTCC CGCAAATCGC CCTCTGGCTT
CCCGCCCTGC TGGGCTACTG A
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| Protein sequence | MNDYVVEVLF GTFALLMVLG APITVALGVA ALAAMLYLGD NPIKMVQMAW SSVGSFPLMA
LPSFILAGAL MEAAGLSRRL ISVAESLAGP FTGGLSAATV VACLFFGAIS GSGPATTAAV
GMLMIPGMIR NGYSRDYAAS TTAAAGGLGI VIPPSIPMII FGISAMGIAP DPAAVEAHGQ
FQSVSISKMF IAGFLPGAVM AGGLLLMNYV RCKRRGYHGS SEPLSLRKFM CACYQGFWAL
LAPVVILGGI YTGMFTPTEA AIIAIFYTLF VGIFIYRELD LGEVFKALEA TTWLAGRVLL
VLFAATIFGR ILVENNVPGI IAGGILGLTT NIYAIWALII GMLLIVGMFM ETLAAIMILV
PVMLPVAYMV GIDPIHFGIV MICTLSVGFQ TPPLGENLFI ASGISGETIE KISVTALPFA
VASTAAIFVI AMFPQIALWL PALLGY
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