Gene Pden_1636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1636 
Symbol 
ID4581016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1617928 
End bp1618539 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID639768951 
Productisochorismatase hydrolase 
Protein accessionYP_915430 
Protein GI119384374 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.26206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAA CCCTCCGCTT CGGCCCCCTG CCGCCCGAGA CGCTGCATCT TTGCATCGAC 
ATGCAAAAAC TGTTCGCGGC CGGCTCGCCC TGGGCCGTGC CATGGATCGA AAGGATCCTG
CCCGGGGTCG CGGCGCTGGT CGCGGCACGG CCCGAACGCA CGCTCTTTAC CCGCTTCATC
CCGCCCGCCC GGCTGAAGGC GGCACCCGGC GCCTGGGCAC GCTATTATGC GGAATGGCCC
GAAATGCTGC GCGAGCGGCT GGACAGCCAA TGGCTGGAAC TGCTGCCGGA ACTGGCGCGG
CACGTCCCGC CCGCCCGGGT GGTCGACAAG CCGGTCTATT CGCCCTGGCA TGACGGCAGG
CTGAACCATT TCCTGCGCGG GGCGGGCATC TCGACGCTGG TCGTCACCGG CGGCGAAACC
GATGTCTGCG TGCTGGCCAC GGTGATGGGT GCGGTTGACC TGGGTTATCG GGTGGTGCTG
GTCAGCGATG CGATCTGCTC CTCGACCGAC ATGGGCCACG ACGCGGCGAT GACGCTCTAT
CGCACCCGGT TCTCGCAGCA GATCGAGACC GCGCCGCTGG CCGAGCTGCT GGATGCCTGG
CCTGCGGGAT AG
 
Protein sequence
MQETLRFGPL PPETLHLCID MQKLFAAGSP WAVPWIERIL PGVAALVAAR PERTLFTRFI 
PPARLKAAPG AWARYYAEWP EMLRERLDSQ WLELLPELAR HVPPARVVDK PVYSPWHDGR
LNHFLRGAGI STLVVTGGET DVCVLATVMG AVDLGYRVVL VSDAICSSTD MGHDAAMTLY
RTRFSQQIET APLAELLDAW PAG