Gene Pden_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1620 
Symbol 
ID4581001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1601253 
End bp1602107 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content52% 
IMG OID639768936 
Productflagellin domain-containing protein 
Protein accessionYP_915415 
Protein GI119384359 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATTG AAATGTCCAG TATTCTGACA AATAATGGTG CGATGGTTGC ATTGCAAACC 
TTGAAGGGTA TCAATGCGAA TCTGACGAAG GCTCAGAACG AAATTTCGAC CGGCAAGAAA
GTTGCCAATG CGCAAGACAA TGCCGCTGTC TGGGCAATTT CGAAGGTCAT GGAATCAGAT
CAGTCGACCT TCAAGACCCT TCAGAGCAAC CTGAACCTGG CCGAGGCAGT GGTGACGACC
GCCCGCACCG GGGCCGAGGA CATTCACGAG CTTCTTGTCG AAATGAGAAA CCTGGCCAGC
AGCGCCGGCA GCGATGCGAA TGATTTCGAA AGTGTTAATG ATCAGATCGT GGCAAAGAGG
GATCAGATCA TTTCGATCAT TGACGGTACC CAGATGAATG GGGTGAATCT CCTCAAAACG
AACCCGATCG GCACTGCAAC CTCCTTTAGC GTGCTGGCAT CTCTTGATCG GACCGCCGGT
ACTGTCGCGA CGACAGCCCA AACAATCACT GTCGATTCCG TTGACTTTGA AGCGGATATT
GAGGCTGCCA CGATTACCAC CATTACGGAT AGTACCACAG CCAGGACTGC GGTCGGAGAA
ATCGAGGCGT TGATCGATGT CGCAAAAAAA GGTGCGGCTG AACTTGGTAC AGCGGCCAAG
CGAATCAACG ACCAATCGAA CTTTGTATCG AAGCTGGCTG ATTCTCTGAC GGCAGGCATC
GGTGCGCTGG TGGATGCCGA TATGGAAGAG GCTTCAGCTC GCTTGCAGGC GCTGCAAACC
CAACAGCAAC TTGGAGTCCA AGCGTTGTCG ATTGCCAACC AGGCGCCGCA AACTATTCTG
TCACTGTTCC GTTGA
 
Protein sequence
MEIEMSSILT NNGAMVALQT LKGINANLTK AQNEISTGKK VANAQDNAAV WAISKVMESD 
QSTFKTLQSN LNLAEAVVTT ARTGAEDIHE LLVEMRNLAS SAGSDANDFE SVNDQIVAKR
DQIISIIDGT QMNGVNLLKT NPIGTATSFS VLASLDRTAG TVATTAQTIT VDSVDFEADI
EAATITTITD STTARTAVGE IEALIDVAKK GAAELGTAAK RINDQSNFVS KLADSLTAGI
GALVDADMEE ASARLQALQT QQQLGVQALS IANQAPQTIL SLFR