Gene Pden_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1612 
Symbol 
ID4580219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1595224 
End bp1595760 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content71% 
IMG OID639768929 
ProductChaC family protein 
Protein accessionYP_915408 
Protein GI119384352 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.839381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCT TGTGGATCTT CGGCTACGGC TCGCTGATCT GGGACCCCGG CTTCGCCCCG 
ACCCGGCAGG AGCCGGCGCG GCTGATGGGC TGGCAGCGCC GCTTTTGCAT CCTGTCGCAG
CATTATCGCG GCACGGCCGA GCAGCCGGGG CTGGTCCTGG CGCTGGACGA GGCACCGGGC
GGGTATTGCG ACGGGCTGGC GCTGGCCGCG CCCGCGGGGC AGGAAGAGGC GGTGCTGGCC
GGCCTGCGGG CGCGCGAACT CGCCCGGCCG GCCTATCGCG AGTTGCGGGT TCCGCTGCTT
CTGCGGGGTG GCCGCCGGGT CGATGCGGTG ACCTATGTCG TCAACGATGC GCATGATTCC
TATCGCCTGA TGCCTGCCGA GGAACAGGCC CGCACCATCG CGCGGGCGGC AGGCGAGAAG
GGCCCGAATT GCGACTATCT GTGGAACACC GCAGCGCGGC TGCGCGAACT CTGCATCGCC
GACCCCGAGA TCGAGGCGCT GGAGCGCGCG GTGCGCCATC TGCGCGAACC GGCCTGA
 
Protein sequence
MAGLWIFGYG SLIWDPGFAP TRQEPARLMG WQRRFCILSQ HYRGTAEQPG LVLALDEAPG 
GYCDGLALAA PAGQEEAVLA GLRARELARP AYRELRVPLL LRGGRRVDAV TYVVNDAHDS
YRLMPAEEQA RTIARAAGEK GPNCDYLWNT AARLRELCIA DPEIEALERA VRHLREPA