| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1604 |
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| Symbol | |
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| ID | 4580211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1585243 |
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| End bp | 1587324 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639768921 |
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| Product | transketolase, central region |
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| Protein accession | YP_915400 |
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| Protein GI | 119384344 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit
[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.167534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.217565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGACG TCGCCGGCGG CTTTTGCCCC GCGCAAGGCG CGCGCCCTGC CGCCGTGGAC
TGGCCCCGCG CCGTCCGCCT GCTGCATCTG TCCCGCGCGC TGGACGAGTT GGAGGAGACC
CGGCTGGTGC CGCAGCGCAA GGTGCTCTAC CAGTTCTCGG CGCGCGGGCA CGACCTGGCG
CAGATCCTGC TGGGCCTGCA ACTCGACGAT CCGCATGATG CGGTCTGCGG CTATTACCGT
TCGCGCCCGA TGCTGCTGGC GCTGGGGCTG GAGCCGACCG AGGCGCTGGT CTCGGCCATG
GCGCGGTCGG GGGGCTATTC GGACGGGCGC GACATCGGCG TCGTCTTCAA CCTGCCCAAT
CCCGGCGGTC CCTCGGCGCT GCCGATGTCG GGCGGTGTCG GCACGCAATA CACGCCGACC
GCCGGCTGGG CGCAGGCGAT CCGCTATCAT GCCGAGGTGC TGGGCCAGCC CGGCTACGAC
CGCGCCATCG CGGTGGCACT GGGGGGCGAC GGCTCGGTCG CCTCGAACGG ATTCTGGTCG
GCGCTGGGGG CGGCGACGGT GGGCCGGCTG CCGATGCTGT TCTGCATCGA GGACAACGGC
TACGGCATCT CGGTGCCCTC GGGCGTGCAG GTGCCGGGCG GCAATATCGC CGCCAACCTG
TCGGGCTGGC AGGGGCTGGC GATCCTTGAC GGCGATGGCG CCGACCCGGC CGAGGCTGCG
GTGCTGACGG CCGAAGCGGT GGATCATGTG CGCGACAGCC GCGCGCCGGT GCTGCTGCGG
CTGTCTGTGC CGCGGCTTCA GGGCCACAGC TATCAGGATA CCCAAGGCTA CAAGCCGCAG
GAACTGGTGG CCCGCGAATG GTCGCGCGAT CCCCTGCCGC GCCTGCACGC GCATCTGGTC
CCGGCGCTGA TGTCGCAGGC GGAGTGGGAG GGCCATGCCC GCGCCGTGCA AGAGCAGGTG
GCCGCGGCGC TGGCCCGCGC GGAATCCGTG CCGCCCGCCG CGCCCCAGAC GGTGACCCGC
CATGTCCGAT ACCAGGGCGA GATGCAGCGC ATGGGCGGCC AGCACCCACT GGGCTACAGG
CCGCCGGCTT TCACCGACAG CCCCTGCGCC GAGGGCCAGC GCATCAACAT GGTGACCGCC
ATCCGCCGCG TGCTGGAGCA GGAGATGGCG CTGAACCCGC GCGTCGCCGT CTTTGGCGAG
GATGTCGGCC CCAAGGGCGG CGTCCATGCC GCGACGCTGG GATTGCAGGA AAAGTTCGGC
GCATTGCGGG TCTTCGACAC CTCGCTGTCC GAAGAGGGCA TCATCGGCCG CGCCGTGGGC
ATGGCGCTGG CCGGGCTGGT GCCGGTGCCC GAGATCCAGT TCCGCAAATA TGCCGACCCG
GCGGCCGAGC AGCTCAACGA TTGCGCCACC CTGCGTTGGC GCACCGCCAA CCGTTTCACC
GCGCCCATCG TGGTGCGGAT GCCCATCGGC TATTTTCGAT GCGGCGATCC CTGGCACAGC
CAGACGAACG AGGTCGCCTT TGTCCACCAA CCCGGCTGGG TCGTTGCCGC GCCCTCGAAC
GCGGCCGATG CGGCGGGCCT CTTGCGCGCG GCGCTGCGCG GCAACGATCC GGTGGTCTTC
CTGGAGCATC GCGAGATGCT GGACCACCCT TCGGCGCGCC GGCCATGGCC TGGCGACGGC
TATGTCCTGC CCTTTGGCCG CGCCGCCATC ACCCGGCGGG GCGAGGATGC GACGGTGGTC
ACATGGGGCG CCATGGTCAA CCGCTGCGAG GCGGCGTCCG AGGGGCTTTC GGTCGAGATC
ATCGACCTGC GCACGCTGAT GCCCTGGGAT GCCGAGGCGG TGCTGGCTTC GGTCCGCCGC
ACCGGGCGCT GCCTGATCGT GCACGAGGAC CTGCGCACCG CCGGCTTCGG CGCCGAGATC
GCCGCCACCG TCGCCGACGA GGCCTTCGAC GCACTGGATG CGCCGGTCGC ACGGCTGGCC
ATGCCCGACA TTCCCAGTCC GCACCATCCG GCGCTGCTGG AGCATGTCGT TCCCTCGGTC
GCGGCCATCC GCGCGCGGCT GGACGAATTG CTGGAGTTCT GA
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| Protein sequence | MEDVAGGFCP AQGARPAAVD WPRAVRLLHL SRALDELEET RLVPQRKVLY QFSARGHDLA
QILLGLQLDD PHDAVCGYYR SRPMLLALGL EPTEALVSAM ARSGGYSDGR DIGVVFNLPN
PGGPSALPMS GGVGTQYTPT AGWAQAIRYH AEVLGQPGYD RAIAVALGGD GSVASNGFWS
ALGAATVGRL PMLFCIEDNG YGISVPSGVQ VPGGNIAANL SGWQGLAILD GDGADPAEAA
VLTAEAVDHV RDSRAPVLLR LSVPRLQGHS YQDTQGYKPQ ELVAREWSRD PLPRLHAHLV
PALMSQAEWE GHARAVQEQV AAALARAESV PPAAPQTVTR HVRYQGEMQR MGGQHPLGYR
PPAFTDSPCA EGQRINMVTA IRRVLEQEMA LNPRVAVFGE DVGPKGGVHA ATLGLQEKFG
ALRVFDTSLS EEGIIGRAVG MALAGLVPVP EIQFRKYADP AAEQLNDCAT LRWRTANRFT
APIVVRMPIG YFRCGDPWHS QTNEVAFVHQ PGWVVAAPSN AADAAGLLRA ALRGNDPVVF
LEHREMLDHP SARRPWPGDG YVLPFGRAAI TRRGEDATVV TWGAMVNRCE AASEGLSVEI
IDLRTLMPWD AEAVLASVRR TGRCLIVHED LRTAGFGAEI AATVADEAFD ALDAPVARLA
MPDIPSPHHP ALLEHVVPSV AAIRARLDEL LEF
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