| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pden_1602 |
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| Symbol | |
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| ID | 4580209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Paracoccus denitrificans PD1222 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008686 |
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| Strand | - |
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| Start bp | 1581989 |
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| End bp | 1583947 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639768919 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_915398 |
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| Protein GI | 119384342 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.218944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCC AAACCCATCC CGGCAGCGTC GCGGCCCTGG CCGCCCTGCT GGCAAGCCCA
GTGCTGGCAC AGGACAGCAG CGTGACCCTG TCGCCGGTCA CGATCGTGAG TTCGGCCGAT
GACGAGACCA TCTCGGAGAC GATCACCGCC GAAGAGATCG AGACCCGCCA GCCCGCGACG
CTGAACGAGC TTTTCGCGCA AAGCCCCGAG GTCGTGGTCA GCGGCGCCAA TCGCATGGCG
GCGCAAAAGA TCTATGTCCG CGGTATCGAG GAGACCATGC TGAACGTCAC CGTGGACGGG
GCGAAGCTGG GCGGCAACAT GTATGCCCAT TCCGGGAATT TCGGCATCGA CCCGGACCTC
CTGAAGCGCG TCGAGGTCGA GGCCGGCGCC GGCTCCGCAC TGGCTGGCCC GGGGGCGTTG
GGCGGGGCCA TCCGCTACGA GACCAAGGAC CCCGAGGACC TGCTGCTGCC CGGCCGCGAT
CAGGGATACA TGCTGAAGCT TTCGGCCCAG ACCAATGGCC GGCGCGTGAC GCCGGGGCTG
GCTTTCTACG GCACCCCGGA CGAGCGGTTC GGCTATCTGG TCTACCTGAC GAAATCCTGG
GCCGACGACT ACAAGGATGG CGAGGGCAAC AAGGTCGCCG ATACCGGCAA CGACCCGCTG
GACGCGCTGG TCAAGCTGCG CTTCCGCCCG GCCGATGGGC ATGAGCTGAG CTTCAGCACC
ACGTATCGCC GCGATAACGG CCGGCGGGCC TATCGCTCGA ATTTCGGCAT TCCGCCCGGC
CTGCCCGATG CCATCCCCGA GGATCAGAAG CTGGGCTGGC GCTCGACCTC GGTCAGCTAT
CGCTACAATC CTGCGGGGGA TCCGCTGGTC GACATGACGG TCTCGGCCTA TGACACCCAC
AGCCGCCTGT TGCGCGACAT CGAGGTCCGG CAGGTTTCGG AATGGGACAC GCGCGGGCTG
GACATCCGCA ACCGCTCGGA TTTCGGCCAG GTCGCGCTGA CCTATGGCTA CGACTACGGC
TGGACGCGGT CGCGTGGGGA AAGCGGAGCC GGGCTTGGCG GCTCCGAACG CGGCGAAAAC
CACGGGCTCT ATGTCCAGGC CGATTACACC CCGACCGAGC AATGGCTGCT TTCGGCCGGG
CTGCGCTATG ACCGCGCCAC GCTCAGGGAC CTGAACGGCA ACGACTACAA GGGCGTGCAT
TTCAGCCCGA ACCTGCGGCT GCGCTATGAG CCGACCGAGG GGCTGGCGCT GTTCGCCTCG
TGGGGCGAGG CCTTTCGCGG CGTGCAGCCT GTCGAGGGGC TGACATTGAT CTGGCCGCTG
GGGCTGGGAC CGCAGACCGA CACCTCGCTG ACCGGAGAGT TGGCGCGCAC GGCGGAACTG
GGCGCCGAAT GGGACCGCGA CGGCTGGCGC GCCGGGATCA GCGGCTTCAC CTCGAAGATC
GAGGACAAGA TCCGCTCGTG GCAGGGCCGC GGCAGCCCGT GGTTCCGCGA AAACGACGGC
GAGATCGAAT CGCGCGGCAT CACCGCCCAT CTCGGCCGCA GCTGGCAGAA CTGGTCGGCC
GACCTGCGCT TCAGCCACAT CGACGTGAAA TACAATGACG AGCCGGTCAG CCCCGGCGAC
TGGCTGGACG GCGTGACGCC CGGCGGCGAC AAGATCGTCC TGGCGCTCGG CTACCAGATG
CCCGCGCAGA ACCTAGAGAT CGGCTGGACC AGCACCGTCG TGCTGAAGCA GACCGACCTG
CCGGCCGATT TCCAGCTTGA CGAACTGCCC GGCTATGACG TGCACGACCT GACCGTCACC
TGGCGCCCGG CCCGGAACCA AAGCTATAGC CTGGCGCTGA CCAATATCTT CGACGAGCAA
TATCTGGACC ATTCGACCGC CTATTACGGC GTCGATGGCT GGTCGAACCT CTATGAAACG
GGCCGCAGCC TGCGTCTGTC GGGCACGATC CGCTTCTGA
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| Protein sequence | MAFQTHPGSV AALAALLASP VLAQDSSVTL SPVTIVSSAD DETISETITA EEIETRQPAT
LNELFAQSPE VVVSGANRMA AQKIYVRGIE ETMLNVTVDG AKLGGNMYAH SGNFGIDPDL
LKRVEVEAGA GSALAGPGAL GGAIRYETKD PEDLLLPGRD QGYMLKLSAQ TNGRRVTPGL
AFYGTPDERF GYLVYLTKSW ADDYKDGEGN KVADTGNDPL DALVKLRFRP ADGHELSFST
TYRRDNGRRA YRSNFGIPPG LPDAIPEDQK LGWRSTSVSY RYNPAGDPLV DMTVSAYDTH
SRLLRDIEVR QVSEWDTRGL DIRNRSDFGQ VALTYGYDYG WTRSRGESGA GLGGSERGEN
HGLYVQADYT PTEQWLLSAG LRYDRATLRD LNGNDYKGVH FSPNLRLRYE PTEGLALFAS
WGEAFRGVQP VEGLTLIWPL GLGPQTDTSL TGELARTAEL GAEWDRDGWR AGISGFTSKI
EDKIRSWQGR GSPWFRENDG EIESRGITAH LGRSWQNWSA DLRFSHIDVK YNDEPVSPGD
WLDGVTPGGD KIVLALGYQM PAQNLEIGWT STVVLKQTDL PADFQLDELP GYDVHDLTVT
WRPARNQSYS LALTNIFDEQ YLDHSTAYYG VDGWSNLYET GRSLRLSGTI RF
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