Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pden_1572 |
Symbol | |
ID | 4580874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Paracoccus denitrificans PD1222 |
Kingdom | Bacteria |
Replicon accession | NC_008686 |
Strand | + |
Start bp | 1546151 |
End bp | 1547206 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639768888 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_915368 |
Protein GI | 119384312 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.413951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0220603 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTGC TGGAAATCCG CGACCTGAAC GTGCGCTTCG CCACCACCGA CGGCGAGGTC TCGGCCGTGA ACGGCATCGA CCTGGACGTG GAACGCGGCC AGACGCTGGG CATCGTCGGC GAGTCGGGCT CGGGCAAGTC GCAGCTTGCC TTTGCCGTCA TGGGCCTGCT GGCCAGGAAC GGCCGCGCCG CGGGCTCGGT CCGCTTCGAC GGGGCCGAGA TCCTGAACGC GACCCCGAAG GTGCTGAACA GGATCCGCGC CCGCCGCATC GCCATGGTGT TCCAGGACCC GATGACCAGC CTGAACTCCT ATATGCGCGT CTCGGACCAG ATGGCCGAGG TCTTGATGCT GCACAAGGGC ATGGGCAAGC GCGAAGCGGT GGCCGAGGCC GCGCGCATGC TCGACGCCGT GAAGATCCCC GATGCGCGGG GCCGCATCCG GCTTTACCCG CACGAGTTTT CCGGCGGGAT GCGCCAGCGG GTGATGATCG CCATGGCGCT GCTCTGCCGC CCCGAACTGC TGATCGCGGA CGAGCCGACC ACGGCGCTGG ACGTGACCGT GCAGGCGCAG ATCATGGAGC TGCTGGCCGA TCTGCGCCGC GAATTCGGCA TGGCGATGAT CCTGATCACC CATGACCTGG GCGTGGTCGC GGGCGCTTGC GAACGGGTGA TGGTCATGTA TGGCGGCAGG GTGATGGAGC GCGCGCCGGT CGGGCCGGTC TTTGCCGATC CCGCGCATCC CTATACCCAG GGTCTGCTGG CGGCGATCCC GCGACTGGAC CAGCAGGGCG AGCAGTTGGC CGCGATTCCC GGCAGCCCGC CCAACATGAC CAACCCGCCC CCCGGCTGCC CCTTTGCGCC GCGCTGCGCC TATGTCATGC CGGTTTGCGA AACCATGCCG CCGTTCGACC CCTTTGCGCC GGGGCGCGAG CGCGCCTGTC ATGCCGGCCT TGCCACGGTG CGCGCCGGCC ATGCGCCGCA GCCCGACCTG CCCGAACCCG CCGCCGCCGA TCTGGACGAG ATGCCGGCAA GCGTCCTCCA GGAGGCCCGG CCATGA
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Protein sequence | MALLEIRDLN VRFATTDGEV SAVNGIDLDV ERGQTLGIVG ESGSGKSQLA FAVMGLLARN GRAAGSVRFD GAEILNATPK VLNRIRARRI AMVFQDPMTS LNSYMRVSDQ MAEVLMLHKG MGKREAVAEA ARMLDAVKIP DARGRIRLYP HEFSGGMRQR VMIAMALLCR PELLIADEPT TALDVTVQAQ IMELLADLRR EFGMAMILIT HDLGVVAGAC ERVMVMYGGR VMERAPVGPV FADPAHPYTQ GLLAAIPRLD QQGEQLAAIP GSPPNMTNPP PGCPFAPRCA YVMPVCETMP PFDPFAPGRE RACHAGLATV RAGHAPQPDL PEPAAADLDE MPASVLQEAR P
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